Information for 25-AGTTCATTTTTAG (Motif 39)

C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T
p-value:1e-6
log p-value:-1.417e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 7.9bp
Average Position of motif in Background35.0 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2A/MA0052.3/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGTTCATTTTTAG-
--TCTATTTTTAGA
 C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T
A C G T A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGTTCATTTTTAG-
--TCTATTTATAGN
 C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T
A C G T A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGTTCATTTTTAG---
-TTCTATTTTTAGNNN
 C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGTTCATTTTTAG-
--KCTATTTTTRGH
 C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGTTCATTTTTAG-
--GCTATTTTTAGC
 C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGTTCATTTTTAG
CACTTCCYCTTT--
 A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C T G
T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGTTCATTTTTAG-
--GCTATTTATAGC
 C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T
A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

HNF1A/MA0046.2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGTTCATTTTTAG--
NGTTAATNATTAACN
 C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

PB0146.1_Mafk_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGTTCATTTTTAG-
CCTTGCAATTTTTNN
 A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PB0172.1_Sox1_2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGTTCATTTTTAG--
CTATAATTGTTAGCG
 C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G