Information for 24-CTAGACHATTGCC (Motif 38)

A G T C C G A T C T G A A C T G T C G A A G T C G T A C C G T A C G A T A C G T C T A G A T G C G T A C
Reverse Opposite:
A C T G A T C G A G T C C G T A C G T A C G A T C A T G A C T G A G C T G T A C A G C T C G T A C T A G
p-value:1e-7
log p-value:-1.743e+01
Information Content per bp:1.777
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 30.8bp
Average Position of motif in Background62.5 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTAGACHATTGCC
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A G T C C G A T C T G A A C T G T C G A A G T C G T A C C G T A C G A T A C G T C T A G A T G C G T A C
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTAGACHATTGCC
CGTCTAGACA------
 A C G T A C G T A C G T A G T C C G A T C T G A A C T G T C G A A G T C G T A C C G T A C G A T A C G T C T A G A T G C G T A C
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTAGACHATTGCC---
--TGACCTTTGCCCTA
 A G T C C G A T C T G A A C T G T C G A A G T C G T A C C G T A C G A T A C G T C T A G A T G C G T A C A C G T A C G T A C G T
A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTAGACHATTGCC---
--TGACCTTTGCCCCA
 A G T C C G A T C T G A A C T G T C G A A G T C G T A C C G T A C G A T A C G T C T A G A T G C G T A C A C G T A C G T A C G T
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTAGACHATTGCC-
CTCACACAATGGCGC
 A C G T A G T C C G A T C T G A A C T G T C G A A G T C G T A C C G T A C G A T A C G T C T A G A T G C G T A C A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTAGACHATTGCC----
GTTGACCTTTGACCTTT
 A G T C C G A T C T G A A C T G T C G A A G T C G T A C C G T A C G A T A C G T C T A G A T G C G T A C A C G T A C G T A C G T A C G T
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T

Bhlha15/MA0607.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTAGACHATTGCC
----ACATATGG-
 A G T C C G A T C T G A A C T G T C G A A G T C G T A C C G T A C G A T A C G T C T A G A T G C G T A C
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTAGACHATTGCC
NNCNNAACAATTNT-
 A C G T A C G T A G T C C G A T C T G A A C T G T C G A A G T C G T A C C G T A C G A T A C G T C T A G A T G C G T A C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTAGACHATTGCC-
--TGACCTTTNCNT
 A G T C C G A T C T G A A C T G T C G A A G T C G T A C C G T A C G A T A C G T C T A G A T G C G T A C A C G T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTAGACHATTGCC
--RAACAATGGN-
 A G T C C G A T C T G A A C T G T C G A A G T C G T A C C G T A C G A T A C G T C T A G A T G C G T A C
A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T