Information for 14-GCGGGGTCAGGCG (Motif 24)

A C T G A T G C A C T G A T C G A T C G A C T G A G C T A G T C T G C A A C T G A C T G A T G C C A T G
Reverse Opposite:
G A T C A T C G A G T C G T A C A C G T T A C G T C G A A G T C A T G C T A G C A G T C A T C G T A G C
p-value:1e-10
log p-value:-2.403e+01
Information Content per bp:1.784
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif47.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets54.2 +/- 28.1bp
Average Position of motif in Background53.6 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0157.1_Rara_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCGGGGTCAGGCG
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C T G A T G C A C T G A T C G A T C G A C T G A G C T A G T C T G C A A C T G A C T G A T G C C A T G
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCGGGGTCAGGCG
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C T G A T G C A C T G A T C G A T C G A C T G A G C T A G T C T G C A A C T G A C T G A T G C C A T G
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCGGGGTCAGGCG-
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A C T G A T G C A C T G A T C G A T C G A C T G A G C T A G T C T G C A A C T G A C T G A T G C C A T G A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCGGGGTCAGGCG-
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C T G A T G C A C T G A T C G A T C G A C T G A G C T A G T C T G C A A C T G A C T G A T G C C A T G A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCGGGGTCAGGCG
ANTGCGGGGGCGGN--
 A C G T A C G T A C G T A C T G A T G C A C T G A T C G A T C G A C T G A G C T A G T C T G C A A C T G A C T G A T G C C A T G
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGGTCAGGCG
GGCGGGGGCGGGGG
 A C G T A C T G A T G C A C T G A T C G A T C G A C T G A G C T A G T C T G C A A C T G A C T G A T G C C A T G
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCGGGGTCAGGCG-
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C T G A T G C A C T G A T C G A T C G A C T G A G C T A G T C T G C A A C T G A C T G A T G C C A T G A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCGGGGTCAGGCG
-AGRGGTCA----
 A C T G A T G C A C T G A T C G A T C G A C T G A G C T A G T C T G C A A C T G A C T G A T G C C A T G
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCGGGGTCAGGCG
AAGGKGRCGCAGGCA
 A C G T A C G T A C T G A T G C A C T G A T C G A T C G A C T G A G C T A G T C T G C A A C T G A C T G A T G C C A T G
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCGGGGTCAGGCG
-MKGGGYGTGGCC
 A C T G A T G C A C T G A T C G A T C G A C T G A G C T A G T C T G C A A C T G A C T G A T G C C A T G
A C G T G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C