Information for 21-MAGWGGYCAGSTTTCA (Motif 23)

G T C A C G T A T A C G C G T A C T A G C T A G A G T C A T G C C G T A A C T G T A G C C G A T A C G T G A C T A G T C G T C A
Reverse Opposite:
A C G T T A C G C T G A G T C A C G T A A T C G T G A C C G A T A T C G C T A G A G T C G A T C G C A T A T G C G C A T A C G T
p-value:1e-10
log p-value:-2.472e+01
Information Content per bp:1.638
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif235.4
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets53.8 +/- 24.9bp
Average Position of motif in Background50.4 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:MAGWGGYCAGSTTTCA
---GKVTCADRTTWC-
 G T C A C G T A T A C G C G T A C T A G C T A G A G T C A T G C C G T A A C T G T A G C C G A T A C G T G A C T A G T C G T C A
A C G T A C G T A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:MAGWGGYCAGSTTTCA
----TGACAGCTGTCA
 G T C A C G T A T A C G C G T A C T A G C T A G A G T C A T G C C G T A A C T G T A G C C G A T A C G T G A C T A G T C G T C A
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A

TGIF1/MA0796.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:MAGWGGYCAGSTTTCA
----TGACAGCTGTCA
 G T C A C G T A T A C G C G T A C T A G C T A G A G T C A T G C C G T A A C T G T A G C C G A T A C G T G A C T A G T C G T C A
A C G T A C G T A C G T A C G T G C A T T C A G T C G A A G T C T C G A A C T G T A G C A G C T T A C G G C A T G T A C C G T A

PKNOX1/MA0782.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:MAGWGGYCAGSTTTCA
----TGACAGGTGTCA
 G T C A C G T A T A C G C G T A C T A G C T A G A G T C A T G C C G T A A C T G T A G C C G A T A C G T G A C T A G T C G T C A
A C G T A C G T A C G T A C G T G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:MAGWGGYCAGSTTTCA
-AGRGGTCA-------
 G T C A C G T A T A C G C G T A C T A G C T A G A G T C A T G C C G T A A C T G T A G C C G A T A C G T G A C T A G T C G T C A
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:MAGWGGYCAGSTTTCA
----TGACAGGTGTCA
 G T C A C G T A T A C G C G T A C T A G C T A G A G T C A T G C C G T A A C T G T A G C C G A T A C G T G A C T A G T C G T C A
A C G T A C G T A C G T A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:MAGWGGYCAGSTTTCA
-TRAGGTCA-------
 G T C A C G T A T A C G C G T A C T A G C T A G A G T C A T G C C G T A A C T G T A G C C G A T A C G T G A C T A G T C G T C A
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:MAGWGGYCAGSTTTCA
--GAGGTCAAAGGTCA
 G T C A C G T A T A C G C G T A C T A G C T A G A G T C A T G C C G T A A C T G T A G C C G A T A C G T G A C T A G T C G T C A
A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:MAGWGGYCAGSTTTCA
CANAGNNCAAAGTCCA
 G T C A C G T A T A C G C G T A C T A G C T A G A G T C A T G C C G T A A C T G T A G C C G A T A C G T G A C T A G T C G T C A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:MAGWGGYCAGSTTTCA
---AGGTCA-------
 G T C A C G T A T A C G C G T A C T A G C T A G A G T C A T G C C G T A A C T G T A G C C G A T A C G T G A C T A G T C G T C A
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T