Information for 12-YTKRRAAATAKYCWKG (Motif 11)

A G C T A C G T A C T G T C G A T C A G C G T A C G T A C G T A A C G T C T G A A C T G A G T C G T A C G C T A A C G T A C T G
Reverse Opposite:
A G T C G T C A C G A T A C T G C T A G G T A C A G C T G T C A A C G T A C G T A C G T A G T C A G C T G T A C G T C A C T G A
p-value:1e-13
log p-value:-3.135e+01
Information Content per bp:1.800
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.3 +/- 32.3bp
Average Position of motif in Background53.2 +/- 2.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:YTKRRAAATAKYCWKG
DCYAAAAATAGM----
 A G C T A C G T A C T G T C G A T C A G C G T A C G T A C G T A A C G T C T G A A C T G A G T C G T A C G C T A A C G T A C T G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:YTKRRAAATAKYCWKG
----AAGATATCCTT-
 A G C T A C G T A C T G T C G A T C A G C G T A C G T A C G T A A C G T C T G A A C T G A G T C G T A C G C T A A C G T A C T G
A C G T A C G T A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--YTKRRAAATAKYCWKG
ATGCTAAAAATAGAA---
 A C G T A C G T A G C T A C G T A C T G T C G A T C A G C G T A C G T A C G T A A C G T C T G A A C T G A G T C G T A C G C T A A C G T A C T G
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:YTKRRAAATAKYCWKG
-CCAAAAATAG-----
 A G C T A C G T A C T G T C G A T C A G C G T A C G T A C G T A A C G T C T G A A C T G A G T C G T A C G C T A A C G T A C T G
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:YTKRRAAATAKYCWKG
GCTAAAAATAGC----
 A G C T A C G T A C T G T C G A T C A G C G T A C G T A C G T A A C G T C T G A A C T G A G T C G T A C G C T A A C G T A C T G
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YTKRRAAATAKYCWKG
KCCAAAAATAGC----
 A G C T A C G T A C T G T C G A T C A G C G T A C G T A C G T A A C G T C T G A A C T G A G T C G T A C G C T A A C G T A C T G
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:YTKRRAAATAKYCWKG
-----GAATATTCAT-
 A G C T A C G T A C T G T C G A T C A G C G T A C G T A C G T A A C G T C T G A A C T G A G T C G T A C G C T A A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:YTKRRAAATAKYCWKG
TCTAAAAATAGA----
 A G C T A C G T A C T G T C G A T C A G C G T A C G T A C G T A A C G T C T G A A C T G A G T C G T A C G C T A A C G T A C T G
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:YTKRRAAATAKYCWKG
ACTATAAATAGA----
 A G C T A C G T A C T G T C G A T C A G C G T A C G T A C G T A A C G T C T G A A C T G A G T C G T A C G C T A A C G T A C T G
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-YTKRRAAATAKYCWKG
NATGGAAAAN-------
 A C G T A G C T A C G T A C T G T C G A T C A G C G T A C G T A C G T A A C G T C T G A A C T G A G T C G T A C G C T A A C G T A C T G
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T