Information for 3-GRCAAGCACAAAC (Motif 4)

T C A G C T A G G A T C C T G A C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T C G A T A C G T A C T G A C G T A C T G A G T C C G A T A G C T C T A G A G C T A G T C
p-value:1e-11
log p-value:-2.684e+01
Information Content per bp:1.822
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.2 +/- 28.5bp
Average Position of motif in Background47.9 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GRCAAGCACAAAC----
-AGCGGCACACACGCAA
 T C A G C T A G G A T C C T G A C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GRCAAGCACAAAC----
-CGAAGCACACAAAATA
 T C A G C T A G G A T C C T G A C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GRCAAGCACAAAC
--AAACCACAGAN
 T C A G C T A G G A T C C T G A C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A A G T C
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GRCAAGCACAAAC
-NWAACCACADNN
 T C A G C T A G G A T C C T G A C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A A G T C
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GRCAAGCACAAAC
--AAACCACANN-
 T C A G C T A G G A T C C T G A C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A A G T C
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GRCAAGCACAAAC--
CAGATGTGCACATACGT
 A C G T A C G T T C A G C T A G G A T C C T G A C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A A G T C A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GRCAAGCACAAAC
--AAACCGCAAA-
 T C A G C T A G G A T C C T G A C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A A G T C
A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GRCAAGCACAAAC--
TACATGTGCACATAAAA
 A C G T A C G T T C A G C T A G G A T C C T G A C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A A G T C A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GRCAAGCACAAAC
-NAAACCACAG--
 T C A G C T A G G A T C C T G A C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A A G T C
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GRCAAGCACAAAC
--AAACCACAGC-
 T C A G C T A G G A T C C T G A C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A A G T C
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T