Information for 14-ACAAGAACGH (Motif 15)

G T C A A G T C G T C A G T C A A C T G G T C A C G T A G T A C C T A G G T C A
Reverse Opposite:
C A G T G A T C C A T G A C G T C A G T T G A C C A G T C A G T C T A G C A G T
p-value:1e-6
log p-value:-1.607e+01
Information Content per bp:1.667
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.74%
Number of Background Sequences with motif495.5
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets47.6 +/- 25.2bp
Average Position of motif in Background49.1 +/- 44.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---ACAAGAACGH--
CAAACAACAACACCT
 A C G T A C G T A C G T G T C A A G T C G T C A G T C A A C T G G T C A C G T A G T A C C T A G G T C A A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----ACAAGAACGH
ATGTCACAACAACAC
 A C G T A C G T A C G T A C G T A C G T G T C A A G T C G T C A G T C A A C T G G T C A C G T A G T A C C T A G G T C A
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ACAAGAACGH
NNNTAACAATTATAN
 A C G T A C G T A C G T A C G T A C G T G T C A A G T C G T C A G T C A A C T G G T C A C G T A G T A C C T A G G T C A
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACAAGAACGH
AACAAT-----
 A C G T G T C A A G T C G T C A G T C A A C T G G T C A C G T A G T A C C T A G G T C A
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:5
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------ACAAGAACGH
NTTNAGAACAATTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C G T C A G T C A A C T G G T C A C G T A G T A C C T A G G T C A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACAAGAACGH
GTAAACAAT-----
 A C G T A C G T A C G T A C G T G T C A A G T C G T C A G T C A A C T G G T C A C G T A G T A C C T A G G T C A
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACAAGAACGH
GACAATGNN--
 A C G T G T C A A G T C G T C A G T C A A C T G G T C A C G T A G T A C C T A G G T C A
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACAAGAACGH
CCAATCAA--
 G T C A A G T C G T C A G T C A A C T G G T C A C G T A G T A C C T A G G T C A
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACAAGAACGH
RNAACAATGG---
 A C G T A C G T A C G T G T C A A G T C G T C A G T C A A C T G G T C A C G T A G T A C C T A G G T C A
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACAAGAACGH
NAACAAT-----
 A C G T A C G T G T C A A G T C G T C A G T C A A C T G G T C A C G T A G T A C C T A G G T C A
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T