Information for 10-GGCTGCGAGGCAK (Motif 12)

A C T G A T C G A G T C A C G T A C T G A G T C T A C G T C G A A C T G A C T G G T A C G T C A A C T G
Reverse Opposite:
G T A C A C G T A C T G A G T C A G T C A C G T A G T C C T A G A G T C C G T A A C T G A T G C A G T C
p-value:1e-8
log p-value:-1.988e+01
Information Content per bp:1.803
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.0 +/- 15.9bp
Average Position of motif in Background60.6 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGCTGCGAGGCAK
-GCTGTG------
 A C T G A T C G A G T C A C G T A C T G A G T C T A C G T C G A A C T G A C T G G T A C G T C A A C T G
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGCGAGGCAK
TGGCAGNCTGCCAG
 A C G T A C T G A T C G A G T C A C G T A C T G A G T C T A C G T C G A A C T G A C T G G T A C G T C A A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCTGCGAGGCAK
NGCTN--------
 A C T G A T C G A G T C A C G T A C T G A G T C T A C G T C G A A C T G A C T G G T A C G T C A A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCTGCGAGGCAK
TWGTCTGV-------
 A C G T A C G T A C T G A T C G A G T C A C G T A C T G A G T C T A C G T C G A A C T G A C T G G T A C G T C A A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCTGCGAGGCAK
GSCTGTCACTCA-
 A C T G A T C G A G T C A C G T A C T G A G T C T A C G T C G A A C T G A C T G G T A C G T C A A C T G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCTGCGAGGCAK
AGGTGNCAGACAG
 A C T G A T C G A G T C A C G T A C T G A G T C T A C G T C G A A C T G A C T G G T A C G T C A A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGCGAGGCAK
TGCCCTNAGGGCA-
 A C G T A C T G A T C G A G T C A C G T A C T G A G T C T A C G T C G A A C T G A C T G G T A C G T C A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGCTGCGAGGCAK--
KGTTGCTAGGMAACA
 A C T G A T C G A G T C A C G T A C T G A G T C T A C G T C G A A C T G A C T G G T A C G T C A A C T G A C G T A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GGCTGCGAGGCAK
-----CTAGGCCT
 A C T G A T C G A G T C A C G T A C T G A G T C T A C G T C G A A C T G A C T G G T A C G T C A A C T G
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGCTGCGAGGCAK
TGCCCTGAGGGCA-
 A C G T A C T G A T C G A G T C A C G T A C T G A G T C T A C G T C G A A C T G A C T G G T A C G T C A A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T