Information for 2-CTACCTGCAT (Motif 3)

A G T C A G C T C T G A A T G C A G T C A C G T A C T G A G T C C G T A A C G T
Reverse Opposite:
G T C A A C G T A C T G A G T C C G T A A C T G T A C G A G C T C T G A A C T G
p-value:1e-9
log p-value:-2.141e+01
Information Content per bp:1.893
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif4.93%
Number of Background Sequences with motif126.8
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets53.1 +/- 27.3bp
Average Position of motif in Background54.1 +/- 36.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM1/MA0646.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTACCTGCAT-
GTACCCGCATN
 A G T C A G C T C T G A A T G C A G T C A C G T A C T G A G T C C G T A A C G T A C G T
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTACCTGCAT-
-TACCCGCATN
 A G T C A G C T C T G A A T G C A G T C A C G T A C T G A G T C C G T A A C G T A C G T
A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

PB0024.1_Gcm1_1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTACCTGCAT----
TCGTACCCGCATCATT
 A C G T A C G T A G T C A G C T C T G A A T G C A G T C A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

PB0155.1_Osr2_2/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CTACCTGCAT-
ACTTGCTACCTACACC
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C T G A A T G C A G T C A C G T A C T G A G T C C G T A A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTACCTGCAT
RYHYACCTGB--
 A C G T A C G T A G T C A G C T C T G A A T G C A G T C A C G T A C T G A G T C C G T A A C G T
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CTACCTGCAT-
ACATGCTACCTAATAC
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C T G A A T G C A G T C A C G T A C T G A G T C C G T A A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTACCTGCAT
SNGCACCTGCHS
 A C G T A C G T A G T C A G C T C T G A A T G C A G T C A C G T A C T G A G T C C G T A A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTACCTGCAT
NCACCTGTN-
 A G T C A G C T C T G A A T G C A G T C A C G T A C T G A G T C C G T A A C G T
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTACCTGCAT
NNCACCTGNN-
 A C G T A G T C A G C T C T G A A T G C A G T C A C G T A C T G A G T C C G T A A C G T
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTACCTGCAT--
--ATTTGCATAA
 A G T C A G C T C T G A A T G C A G T C A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A