Information for 4-CTGGGTGACAATC (Motif 9)

A T G C C G A T C T A G A T C G A C T G A G C T A C T G T G C A A G T C C G T A C G T A C G A T G A T C
Reverse Opposite:
C T A G C G T A A C G T A C G T A C T G A C G T G T A C C T G A G T A C A T G C A G T C C G T A A T C G
p-value:1e-7
log p-value:-1.817e+01
Information Content per bp:1.763
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.19%
Number of Background Sequences with motif77.6
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets42.9 +/- 23.8bp
Average Position of motif in Background53.7 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:CTGGGTGACAATC--
------GACAATGNN
 A T G C C G A T C T A G A T C G A C T G A G C T A C T G T G C A A G T C C G T A C G T A C G A T G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGGGTGACAATC-----
-TNCNNAACAATTTTTNC
 A T G C C G A T C T A G A T C G A C T G A G C T A C T G T G C A A G T C C G T A C G T A C G A T G A T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.65
Offset:7
Orientation:forward strand
Alignment:CTGGGTGACAATC--
-------CCAATCAA
 A T G C C G A T C T A G A T C G A C T G A G C T A C T G T G C A A G T C C G T A C G T A C G A T G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGGGTGACAATC--
-NNCNNAACAATTNT
 A T G C C G A T C T A G A T C G A C T G A G C T A C T G T G C A A G T C C G T A C G T A C G A T G A T C A C G T A C G T
A C G T G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:CTGGGTGACAATC
------AACAAT-
 A T G C C G A T C T A G A T C G A C T G A G C T A C T G T G C A A G T C C G T A C G T A C G A T G A T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTGGGTGACAATC
---GTAAACAAT-
 A T G C C G A T C T A G A T C G A C T G A G C T A C T G T G C A A G T C C G T A C G T A C G A T G A T C
A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CTGGGTGACAATC
-----NAACAAT-
 A T G C C G A T C T A G A T C G A C T G A G C T A C T G T G C A A G T C C G T A C G T A C G A T G A T C
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTGGGTGACAATC
---GGTGCCAAGT
 A T G C C G A T C T A G A T C G A C T G A G C T A C T G T G C A A G T C C G T A C G T A C G A T G A T C
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTGGGTGACAATC-
----RNAACAATGG
 A T G C C G A T C T A G A T C G A C T G A G C T A C T G T G C A A G T C C G T A C G T A C G A T G A T C A C G T
A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTGGGTGACAATC--
---SCTGTCAVTCAV
 A T G C C G A T C T A G A T C G A C T G A G C T A C T G T G C A A G T C C G T A C G T A C G A T G A T C A C G T A C G T
A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A