Information for 4-GAAAACAAGCTTGTCY (Motif 6)

A C T G C T G A G T C A C T G A T G C A A G T C G T C A G T C A C T A G A G T C C G A T C G A T C T A G A G C T T A G C A G T C
Reverse Opposite:
C T A G A T C G C T G A A G T C C G T A G C T A A C T G G A T C A C G T A C G T A C T G A C G T G A C T A C G T A G C T G T A C
p-value:1e-10
log p-value:-2.407e+01
Information Content per bp:1.722
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets26.5 +/- 20.1bp
Average Position of motif in Background33.6 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.71
Offset:5
Orientation:forward strand
Alignment:GAAAACAAGCTTGTCY
-----CAAGCTT----
 A C T G C T G A G T C A C T G A T G C A A G T C G T C A G T C A C T A G A G T C C G A T C G A T C T A G A G C T T A G C A G T C
A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAAAACAAGCTTGTCY
ATGTAAACADGS------
 A C G T A C G T A C T G C T G A G T C A C T G A T G C A A G T C G T C A G T C A C T A G A G T C C G A T C G A T C T A G A G C T T A G C A G T C
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GAAAACAAGCTTGTCY
GTAAACAAT-------
 A C T G C T G A G T C A C T G A T G C A A G T C G T C A G T C A C T A G A G T C C G A T C G A T C T A G A G C T T A G C A G T C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GAAAACAAGCTTGTCY
TGTAAACAGGA------
 A C G T A C T G C T G A G T C A C T G A T G C A A G T C G T C A G T C A C T A G A G T C C G A T C G A T C T A G A G C T T A G C A G T C
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GAAAACAAGCTTGTCY
-----CACGCA-----
 A C T G C T G A G T C A C T G A T G C A A G T C G T C A G T C A C T A G A G T C C G A T C G A T C T A G A G C T T A G C A G T C
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GAAAACAAGCTTGTCY
GCAGCCAAGCGTGACN
 A C T G C T G A G T C A C T G A T G C A A G T C G T C A G T C A C T A G A G T C C G A T C G A T C T A G A G C T T A G C A G T C
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GAAAACAAGCTTGTCY
SCAGYCADGCATGAC-
 A C T G C T G A G T C A C T G A T G C A A G T C G T C A G T C A C T A G A G T C C G A T C G A T C T A G A G C T T A G C A G T C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T

FOXO3/MA0157.2/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GAAAACAAGCTTGTCY
GTAAACAA--------
 A C T G C T G A G T C A C T G A T G C A A G T C G T C A G T C A C T A G A G T C C G A T C G A T C T A G A G C T T A G C A G T C
C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GAAAACAAGCTTGTCY
GTAAACAA--------
 A C T G C T G A G T C A C T G A T G C A A G T C G T C A G T C A C T A G A G T C C G A T C G A T C T A G A G C T T A G C A G T C
C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GAAAACAAGCTTGTCY
AAAGTAAACAAAAATT---
 A C G T A C G T A C G T A C T G C T G A G T C A C T G A T G C A A G T C G T C A G T C A C T A G A G T C C G A T C G A T C T A G A G C T T A G C A G T C
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T A C G T A C G T