Information for 3-KGCGCCMTCTGGTGGC (Motif 6)

C A T G T A C G G A T C A C T G A G T C A G T C G T A C A G C T A G T C C G A T C T A G A T C G A C G T A C T G T A C G G T A C
Reverse Opposite:
C A T G A G T C A G T C G T C A T A G C A G T C C G T A A C T G C T G A C A T G A C T G A C T G T G A C C T A G A T G C G T A C
p-value:1e-23
log p-value:-5.321e+01
Information Content per bp:1.734
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif28.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets44.8 +/- 20.4bp
Average Position of motif in Background43.4 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.92
Offset:-4
Orientation:forward strand
Alignment:----KGCGCCMTCTGGTGGC
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C A T G T A C G G A T C A C T G A G T C A G T C G T A C A G C T A G T C C G A T C T A G A T C G A C G T A C T G T A C G G T A C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-KGCGCCMTCTGGTGGC--
TAGCGCCCCCTGGTGGCCA
 A C G T C A T G T A C G G A T C A C T G A G T C A G T C G T A C A G C T A G T C C G A T C T A G A T C G A C G T A C T G T A C G G T A C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--KGCGCCMTCTGGTGGC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T C A T G T A C G G A T C A C T G A G T C A G T C G T A C A G C T A G T C C G A T C T A G A T C G A C G T A C T G T A C G G T A C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:KGCGCCMTCTGGTGGC
---GCCATCTGTT---
 C A T G T A C G G A T C A C T G A G T C A G T C G T A C A G C T A G T C C G A T C T A G A T C G A C G T A C T G T A C G G T A C
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:KGCGCCMTCTGGTGGC
---ACCATCTGTT---
 C A T G T A C G G A T C A C T G A G T C A G T C G T A C A G C T A G T C C G A T C T A G A T C G A C G T A C T G T A C G G T A C
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:KGCGCCMTCTGGTGGC
---RCCATMTGTT---
 C A T G T A C G G A T C A C T G A G T C A G T C G T A C A G C T A G T C C G A T C T A G A T C G A C G T A C T G T A C G G T A C
A C G T A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:KGCGCCMTCTGGTGGC
--CACCCCCGGGGGGG
 C A T G T A C G G A T C A C T G A G T C A G T C G T A C A G C T A G T C C G A T C T A G A T C G A C G T A C T G T A C G G T A C
A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---KGCGCCMTCTGGTGGC
GGTCCCGCCCCCTTCTC--
 A C G T A C G T A C G T C A T G T A C G G A T C A C T G A G T C A G T C G T A C A G C T A G T C C G A T C T A G A T C G A C G T A C T G T A C G G T A C
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:KGCGCCMTCTGGTGGC-
--CCCCCCCGGGGGGGT
 C A T G T A C G G A T C A C T G A G T C A G T C G T A C A G C T A G T C C G A T C T A G A T C G A C G T A C T G T A C G G T A C A C G T
A C G T A C G T A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:KGCGCCMTCTGGTGGC
GCCGCCATCTTG----
 C A T G T A C G G A T C A C T G A G T C A G T C G T A C A G C T A G T C C G A T C T A G A T C G A C G T A C T G T A C G G T A C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T