Information for 1-NAAACCACADMMW (Motif 3)

A G T C G C T A C G T A T C G A A G T C A G T C G T C A A T G C G C T A C A T G T G C A G T C A C G T A
Reverse Opposite:
G C A T C A G T A C G T G T A C C G A T A T C G A C G T A C T G A C T G A G C T G C A T C G A T T A C G
p-value:1e-54
log p-value:-1.264e+02
Information Content per bp:1.570
Number of Target Sequences with motif148.0
Percentage of Target Sequences with motif17.47%
Number of Background Sequences with motif1739.0
Percentage of Background Sequences with motif3.66%
Average Position of motif in Targets51.8 +/- 23.4bp
Average Position of motif in Background51.7 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:forward strand
Alignment:NAAACCACADMMW
NWAACCACADNN-
 A G T C G C T A C G T A T C G A A G T C A G T C G T C A A T G C G C T A C A T G T G C A G T C A C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:NAAACCACADMMW
-AAACCACAGAN-
 A G T C G C T A C G T A T C G A A G T C A G T C G T C A A T G C G C T A C A T G T G C A G T C A C G T A
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.92
Offset:1
Orientation:forward strand
Alignment:NAAACCACADMMW
-AAACCACANN--
 A G T C G C T A C G T A T C G A A G T C A G T C G T C A A T G C G C T A C A T G T G C A G T C A C G T A
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:NAAACCACADMMW
-AAACCACAGC--
 A G T C G C T A C G T A T C G A A G T C A G T C G T C A A T G C G C T A C A T G T G C A G T C A C G T A
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.89
Offset:0
Orientation:forward strand
Alignment:NAAACCACADMMW
NAAACCACAG---
 A G T C G C T A C G T A T C G A A G T C A G T C G T C A A T G C G C T A C A T G T G C A G T C A C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.80
Offset:1
Orientation:forward strand
Alignment:NAAACCACADMMW
-AAACCGCAAA--
 A G T C G C T A C G T A T C G A A G T C A G T C G T C A A T G C G C T A C A T G T G C A G T C A C G T A
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.79
Offset:2
Orientation:forward strand
Alignment:NAAACCACADMMW
--ATCCAC-----
 A G T C G C T A C G T A T C G A A G T C A G T C G T C A A T G C G C T A C A T G T G C A G T C A C G T A
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.77
Offset:1
Orientation:forward strand
Alignment:NAAACCACADMMW
-AAACCGCAA---
 A G T C G C T A C G T A T C G A A G T C A G T C G T C A A T G C G C T A C A T G T G C A G T C A C G T A
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:9
Score:0.73
Offset:3
Orientation:forward strand
Alignment:NAAACCACADMMW
---ACCACTTAA-
 A G T C G C T A C G T A T C G A A G T C A G T C G T C A A T G C G C T A C A T G T G C A G T C A C G T A
A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:NAAACCACADMMW--
---ACCACATCCTGT
 A G T C G C T A C G T A T C G A A G T C A G T C G T C A A T G C G C T A C A T G T G C A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T