Information for 8-GGCCTGGCATGAGCGC (Motif 10)

A C T G C T A G A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C T G C G T A A C T G G T A C A C T G G T A C
Reverse Opposite:
A C T G G T A C A C T G A G T C A C G T G T A C C G T A A C G T A C T G A G T C G T A C C G T A C T A G A C T G A G T C A G T C
p-value:1e-10
log p-value:-2.495e+01
Information Content per bp:1.917
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.4 +/- 19.7bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGCCTGGCATGAGCGC
AGGCCTAG---------
 A C G T A C T G C T A G A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C T G C G T A A C T G G T A C A C T G G T A C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTGGCATGAGCGC
ATGCCCGGGCATGT----
 A C G T A C G T A C T G C T A G A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C T G C G T A A C T G G T A C A C T G G T A C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGCCTGGCATGAGCGC
AGGCCTNG---------
 A C G T A C T G C T A G A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C T G C G T A A C T G G T A C A C T G G T A C
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGCCTGGCATGAGCGC
GGTCTGGCAT------
 A C T G C T A G A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C T G C G T A A C T G G T A C A C T G G T A C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGCCTGGCATGAGCGC
---GTGGCGTGACNG-
 A C T G C T A G A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C T G C G T A A C T G G T A C A C T G G T A C
A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGCCTGGCATGAGCGC
-GGTTGGCAT------
 A C T G C T A G A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C T G C G T A A C T G G T A C A C T G G T A C
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTGGCATGAGCGC
NGTAGGTTGGCATNNN---
 A C G T A C G T A C G T A C T G C T A G A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C T G C G T A A C T G G T A C A C T G G T A C
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTGGCATGAGCGC
TGWCCTCARNTGACC--
 A C G T A C T G C T A G A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C T G C G T A A C T G G T A C A C T G G T A C
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GGCCTGGCATGAGCGC
--CTTGGCAA------
 A C T G C T A G A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C T G C G T A A C T G G T A C A C T G G T A C
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GGCCTGGCATGAGCGC
--NTTGGCANN-----
 A C T G C T A G A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C T G C G T A A C T G G T A C A C T G G T A C
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T