Information for 8-GTGGGCAAGCCCC (Motif 9)

A C T G C G A T A C T G A C T G A T C G A T G C C G T A G T C A A C T G A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G C T A G A C T G A G T C A C G T A C G T A T C G A T G C A G T C A G T C C G T A T G A C
p-value:1e-11
log p-value:-2.734e+01
Information Content per bp:1.863
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.4 +/- 13.1bp
Average Position of motif in Background55.5 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB2/MA0778.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GTGGGCAAGCCCC-
-AGGGGAATCCCCT
 A C T G C G A T A C T G A C T G A T C G A T G C C G T A G T C A A C T G A G T C A G T C A G T C A G T C A C G T
A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GTGGGCAAGCCCC
-GGGGGAATCCCC
 A C T G C G A T A C T G A C T G A T C G A T G C C G T A G T C A A C T G A G T C A G T C A G T C A G T C
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GTGGGCAAGCCCC-
-AGGGGAATCCCCT
 A C T G C G A T A C T G A C T G A T C G A T G C C G T A G T C A A C T G A G T C A G T C A G T C A G T C A C G T
A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTGGGCAAGCCCC-
--GGGAAATCCCCN
 A C T G C G A T A C T G A C T G A T C G A T G C C G T A G T C A A C T G A G T C A G T C A G T C A G T C A C G T
A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GTGGGCAAGCCCC
---GGAAATCCCC
 A C T G C G A T A C T G A C T G A T C G A T G C C G T A G T C A A C T G A G T C A G T C A G T C A G T C
A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GTGGGCAAGCCCC
NNNNTTGGGCACNNCN-
 A C G T A C G T A C G T A C G T A C T G C G A T A C T G A C T G A T C G A T G C C G T A G T C A A C T G A G T C A G T C A G T C A G T C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C A C G T

KLF14/MA0740.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GTGGGCAAGCCCC---
--GGCCACGCCCCCTT
 A C T G C G A T A C T G A C T G A T C G A T G C C G T A G T C A A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GTGGGCAAGCCCC
---GGAAANCCCC
 A C T G C G A T A C T G A C T G A T C G A T G C C G T A G T C A A C T G A G T C A G T C A G T C A G T C
A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTGGGCAAGCCCC----
TAAGCCACGCCCCCTTT
 A C T G C G A T A C T G A C T G A T C G A T G C C G T A G T C A A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTGGGCAAGCCCC
NGTGGGCAT-----
 A C G T A C T G C G A T A C T G A C T G A T C G A T G C C G T A G T C A A C T G A G T C A G T C A G T C A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T