Information for 9-CATCTGCTGA (Motif 6)

T G A C T G C A C G A T A G T C G C A T C A T G A T G C G C A T A T C G G T C A
Reverse Opposite:
C A G T T A G C C G T A T A C G G T A C C G T A T C A G G C T A A C G T A C T G
p-value:1e-12
log p-value:-2.955e+01
Information Content per bp:1.661
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif9.72%
Number of Background Sequences with motif1852.7
Percentage of Background Sequences with motif3.88%
Average Position of motif in Targets47.3 +/- 24.5bp
Average Position of motif in Background51.3 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCTGA
ACCATCTGTT--
 A C G T A C G T T G A C T G C A C G A T A G T C G C A T C A T G A T G C G C A T A T C G G T C A
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCTGA
GCCATCTGTT--
 A C G T A C G T T G A C T G C A C G A T A G T C G C A T C A T G A T G C G C A T A T C G G T C A
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CATCTGCTGA
CAGCTGNT--
 T G A C T G C A C G A T A G T C G C A T C A T G A T G C G C A T A T C G G T C A
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CATCTGCTGA
NCAGCTGCTG-
 A C G T T G A C T G C A C G A T A G T C G C A T C A T G A T G C G C A T A T C G G T C A
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CATCTGCTGA-
AATTTGCTGAC
 T G A C T G C A C G A T A G T C G C A T C A T G A T G C G C A T A T C G G T C A A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------CATCTGCTGA-
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T A C G T A C G T T G A C T G C A C G A T A G T C G C A T C A T G A T G C G C A T A T C G G T C A A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCTGA
AGCAGCTGCT--
 A C G T A C G T T G A C T G C A C G A T A G T C G C A T C A T G A T G C G C A T A T C G G T C A
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CATCTGCTGA
NVCAGCTGBBNN
 A C G T A C G T T G A C T G C A C G A T A G T C G C A T C A T G A T G C G C A T A T C G G T C A
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:9
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CATCTGCTGA
CGACCATCTGTT--
 A C G T A C G T A C G T A C G T T G A C T G C A C G A T A G T C G C A T C A T G A T G C G C A T A T C G G T C A
G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CATCTGCTGA
RCCATMTGTT--
 A C G T A C G T T G A C T G C A C G A T A G T C G C A T C A T G A T G C G C A T A T C G G T C A
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T