Information for 5-TTTATTCCTTTTTAAG (Motif 17)

A C G T G A C T A G C T G C T A C G A T A G C T T A G C G T A C G A C T A C G T A C G T C G A T A G C T C G T A C T G A A C T G
Reverse Opposite:
G T A C A G C T C G A T T C G A C G T A G T C A G T C A C G T A A C T G A C T G T C G A C G T A C G A T C T G A C G T A G T C A
p-value:1e-7
log p-value:-1.746e+01
Information Content per bp:1.690
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif26.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets41.9 +/- 26.3bp
Average Position of motif in Background43.8 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TTTATTCCTTTTTAAG--
------CCTTTTATAGNC
 A C G T G A C T A G C T G C T A C G A T A G C T T A G C G T A C G A C T A C G T A C G T C G A T A G C T C G T A C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

ONECUT3/MA0757.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTTATTCCTTTTTAAG
NTTATTGATTTTTT--
 A C G T G A C T A G C T G C T A C G A T A G C T T A G C G T A C G A C T A C G T A C G T C G A T A G C T C G T A C T G A A C T G
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTTATTCCTTTTTAAG---
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T G A C T A G C T G C T A C G A T A G C T T A G C G T A C G A C T A C G T A C G T C G A T A G C T C G T A C T G A A C T G A C G T A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

PB0184.1_Tbp_2/Jaspar

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:TTTATTCCTTTTTAAG-----
------CCGATTTAAGCGACC
 A C G T G A C T A G C T G C T A C G A T A G C T T A G C G T A C G A C T A C G T A C G T C G A T A G C T C G T A C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C A T G C A T C G C G T A G A C T C G A T C G A T G T C A G C T A A T C G T A G C A C T G G C T A A C G T G T A C

ONECUT2/MA0756.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTTATTCCTTTTTAAG
ATTATCGATTTTTT--
 A C G T G A C T A G C T G C T A C G A T A G C T T A G C G T A C G A C T A C G T A C G T C G A T A G C T C G T A C T G A A C T G
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTTATTCCTTTTTAAG---
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T G A C T A G C T G C T A C G A T A G C T T A G C G T A C G A C T A C G T A C G T C G A T A G C T C G T A C T G A A C T G A C G T A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

CDX2/MA0465.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTTATTCCTTTTTAAG
TTTTATGGCTN------
 A C G T A C G T G A C T A G C T G C T A C G A T A G C T T A G C G T A C G A C T A C G T A C G T C G A T A G C T C G T A C T G A A C T G
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0126.1_Obox6/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTTATTCCTTTTTAAG
CNATAATCCGNTTNT--
 A C G T A C G T G A C T A G C T G C T A C G A T A G C T T A G C G T A C G A C T A C G T A C G T C G A T A G C T C G T A C T G A A C T G
T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TTTATTCCTTTTTAAG
NAATTTTATTACCNNN----
 A C G T A C G T A C G T A C G T A C G T G A C T A G C T G C T A C G A T A G C T T A G C G T A C G A C T A C G T A C G T C G A T A G C T C G T A C T G A A C T G
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T A C G T A C G T A C G T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTTATTCCTTTTTAAG
ANTATCGATTTTTN--
 A C G T G A C T A G C T G C T A C G A T A G C T T A G C G T A C G A C T A C G T A C G T C G A T A G C T C G T A C T G A A C T G
C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T A C G T A C G T