Information for 2-CCCGGCCGACCGC (Motif 9)

A G T C A G T C A G T C A C T G A C T G A T G C G T A C A C T G C T G A A G T C A G T C A C T G A G T C
Reverse Opposite:
A C T G G T A C C T A G A C T G A G C T A G T C A C T G A T C G A G T C A G T C A C T G A C T G A C T G
p-value:1e-9
log p-value:-2.231e+01
Information Content per bp:1.937
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.4 +/- 29.6bp
Average Position of motif in Background60.9 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCCGGCCGACCGC-
TCCCAGMCRAGCCCC
 A C G T A G T C A G T C A G T C A C T G A C T G A T G C G T A C A C T G C T G A A G T C A G T C A C T G A G T C A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

ZBTB7A/MA0750.1/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CCCGGCCGACCGC---
----GGCGACCACCGA
 A G T C A G T C A G T C A C T G A C T G A T G C G T A C A C T G C T G A A G T C A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CCCGGCCGACCGC
CTAGGCCT-----
 A G T C A G T C A G T C A C T G A C T G A T G C G T A C A C T G C T G A A G T C A G T C A C T G A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CCCGGCCGACCGC
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C T G A C T G A T G C G T A C A C T G C T G A A G T C A G T C A C T G A G T C
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCCGGCCGACCGC-
GCCCCGCCCCCTCCC
 A C G T A G T C A G T C A G T C A C T G A C T G A T G C G T A C A C T G C T G A A G T C A G T C A C T G A G T C A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CCCGGCCGACCGC
GCTCCGCCCMCY--
 A C G T A G T C A G T C A G T C A C T G A C T G A T G C G T A C A C T G C T G A A G T C A G T C A C T G A G T C
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:7
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CCCGGCCGACCGC
CTATCCCCGCCCTATT--
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C T G A C T G A T G C G T A C A C T G C T G A A G T C A G T C A C T G A G T C
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CCCGGCCGACCGC----
-----GCGACCACACTG
 A G T C A G T C A G T C A C T G A C T G A T G C G T A C A C T G C T G A A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CCCGGCCGACCGC
GCCMCGCCCMCY--
 A C G T A G T C A G T C A G T C A C T G A C T G A T G C G T A C A C T G C T G A A G T C A G T C A C T G A G T C
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CCCGGCCGACCGC
GGTCCCGCCC------
 A C G T A C G T A C G T A G T C A G T C A G T C A C T G A C T G A T G C G T A C A C T G C T G A A G T C A G T C A C T G A G T C
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T