Information for 6-TCTTACTAGTTGG (Motif 12)

A G C T A G T C A C G T A C G T C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C T G C T A G
Reverse Opposite:
A G T C G T A C C G T A C G T A A G T C A C G T C G T A A C T G A C G T G T C A C G T A A C T G C T G A
p-value:1e-4
log p-value:-1.127e+01
Information Content per bp:1.929
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets17.0 +/- 5.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCTTACTAGTTGG-
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C T G C T A G A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCTTACTAGTTGG
GTTAACTAGN---
 A G C T A G T C A C G T A C G T C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C T G C T A G
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T

PH0089.1_Isx/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCTTACTAGTTGG----
-ACTCCTAATTAGTCGT
 A G C T A G T C A C G T A C G T C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCTTACTAGTTGG
NTTTTACGAGN---
 A C G T A G C T A G T C A C G T A C G T C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C T G C T A G
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T

GBX1/MA0889.1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCTTACTAGTTGG-
----GCTAATTAGN
 A G C T A G T C A C G T A C G T C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C T G C T A G A C G T
A C G T A C G T A C G T A C G T T C A G A T G C C G A T C T G A C T G A A C G T A G C T C T G A T A C G A G C T

MSX2/MA0708.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TCTTACTAGTTGG
-----NTAATTGG
 A G C T A G T C A C G T A C G T C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C T G C T A G
A C G T A C G T A C G T A C G T A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G

PH0028.1_En1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCTTACTAGTTGG-
GNATTAATTAGTTNNC
 A C G T A C G T A G C T A G T C A C G T A C G T C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C T G C T A G A C G T
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

PH0034.1_Gbx2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCTTACTAGTTGG----
AANCGCTAATTAGCNNN
 A G C T A G T C A C G T A C G T C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C T G C T A G A C G T A C G T A C G T A C G T
G T C A T G C A G A C T A T G C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C A C T G A T G C G C A T

PH0048.1_Hoxa13/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TCTTACTAGTTGG
ANATTTTACGAGNNNN
 A C G T A C G T A C G T A G C T A G T C A C G T A C G T C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C T G C T A G
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

PH0133.1_Pax7/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCTTACTAGTTGG----
NNNTNCTAATTAGNTCN
 A G C T A G T C A C G T A C G T C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C T G C T A G A C G T A C G T A C G T A C G T
G A C T G T C A A C T G C G A T T G C A G A T C G A C T T C G A C G T A G C A T A G C T C T G A C T A G A C G T C G A T A T G C C A T G