Information for 23-AAGTTAACTTTGC (Motif 34)

C G T A C G T A A C T G A C G T C G A T C G T A C G T A A G T C A C G T A C G T A C G T A C T G G T A C
Reverse Opposite:
A C T G A G T C C G T A C G T A C G T A A C T G A C G T C G A T C G T A C G T A A G T C A C G T A C G T
p-value:1e-4
log p-value:-9.588e+00
Information Content per bp:1.924
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 2.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0081.1_Tcf1_1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AAGTTAACTTTGC
NNNTTAGTTAACTNANN
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T C G A T C G T A C G T A A G T C A C G T A C G T A C G T A C T G G T A C
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AAGTTAACTTTGC
NTTTTAGTTAACNNAGN
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T C G A T C G T A C G T A A G T C A C G T A C G T A C G T A C T G G T A C
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AAGTTAACTTTGC-----
---TGGACTTTGNNCTCN
 C G T A C G T A A C T G A C G T C G A T C G T A C G T A A G T C A C G T A C G T A C G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AAGTTAACTTTGC------
---TGGACTTTGNNCTNTG
 C G T A C G T A A C T G A C G T C G A T C G T A C G T A A G T C A C G T A C G T A C G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AAGTTAACTTTGC
---TTGACTTTT-
 C G T A C G T A A C T G A C G T C G A T C G T A C G T A A G T C A C G T A C G T A C G T A C T G G T A C
A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAGTTAACTTTGC
-TGTTTACTTAGG
 C G T A C G T A A C T G A C G T C G A T C G T A C G T A A G T C A C G T A C G T A C G T A C T G G T A C
A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAGTTAACTTTGC
TCCATGTTTACTTTG-
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T C G A T C G T A C G T A A G T C A C G T A C G T A C G T A C T G G T A C
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAGTTAACTTTGC----
-ATTGGACTTTGACCCC
 C G T A C G T A A C T G A C G T C G A T C G T A C G T A A G T C A C G T A C G T A C G T A C T G G T A C A C G T A C G T A C G T A C G T
A C G T C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

MYBL1/MA0776.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAGTTAACTTTGC
ACCGTTAACGGT--
 A C G T C G T A C G T A A C T G A C G T C G A T C G T A C G T A A G T C A C G T A C G T A C G T A C T G G T A C
C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAGTTAACTTTGC
-TGTTTACTTT--
 C G T A C G T A A C T G A C G T C G A T C G T A C G T A A G T C A C G T A C G T A C G T A C T G G T A C
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T