Information for 5-AGATAGCGRA (Motif 19)

C G T A A C T G C G T A A C G T C G T A A C T G G T A C A T C G C T A G C G T A
Reverse Opposite:
A C G T A G T C A T G C A C T G A G T C A C G T C G T A A C G T A G T C A C G T
p-value:1e-8
log p-value:-2.070e+01
Information Content per bp:1.902
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif25.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets51.8 +/- 28.8bp
Average Position of motif in Background48.9 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGATAGCGRA
AGATAASR--
 C G T A A C T G C G T A A C G T C G T A A C T G G T A C A T C G C T A G C G T A
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGATAGCGRA
AGATAAGA--
 C G T A A C T G C G T A A C G T C G T A A C T G G T A C A T C G C T A G C G T A
G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AGATAGCGRA--
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C T G G T A C A T C G C T A G C G T A A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGATAGCGRA
ANAGATAAGAA-
 A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C T G G T A C A T C G C T A G C G T A
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T

YY1(Zf)/Promoter/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGATAGCGRA
CAAGATGGCGGC
 A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C T G G T A C A T C G C T A G C G T A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGATAGCGRA
NAGATAAGNN-
 A C G T C G T A A C T G C G T A A C G T C G T A A C T G G T A C A T C G C T A G C G T A
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AGATAGCGRA
KCCAAAAATAGC---
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C T G G T A C A T C G C T A G C G T A
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AGATAGCGRA
DCYAAAAATAGM---
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C T G G T A C A T C G C T A G C G T A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGATAGCGRA----
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C T G G T A C A T C G C T A G C G T A A C G T A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGATAGCGRA
CAGATAAGGN-
 A C G T C G T A A C T G C G T A A C G T C G T A A C T G G T A C A T C G C T A G C G T A
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T