Information for 15-CATCATGAAACAA (Motif 15)

G T A C C T G A A C G T A T G C C G T A A C G T C T A G C T G A C T G A C G T A A T G C C G T A G T C A
Reverse Opposite:
A C G T A C G T T A C G G C A T A G C T A G C T A G T C G T C A A C G T A T C G G T C A A G C T C A T G
p-value:1e-9
log p-value:-2.155e+01
Information Content per bp:1.775
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.2 +/- 20.8bp
Average Position of motif in Background62.2 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CATCATGAAACAA
--TCATCAATCA-
 G T A C C T G A A C G T A T G C C G T A A C G T C T A G C T G A C T G A C G T A A T G C C G T A G T C A
A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CATCATGAAACAA
-GCCATAAATCA-
 G T A C C T G A A C G T A T G C C G T A A C G T C T A G C T G A C T G A C G T A A T G C C G T A G T C A
A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CATCATGAAACAA
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A C G T A C G T G T A C C T G A A C G T A T G C C G T A A C G T C T A G C T G A C T G A C G T A A T G C C G T A G T C A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CATCATGAAACAA
CCACACAGCAGGAGA---
 A C G T A C G T A C G T A C G T A C G T G T A C C T G A A C G T A T G C C G T A A C G T C T A G C T G A C T G A C G T A A T G C C G T A G T C A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CATCATGAAACAA
GAGCACAGCAGGACA---
 A C G T A C G T A C G T A C G T A C G T G T A C C T G A A C G T A T G C C G T A A C G T C T A G C T G A C T G A C G T A A T G C C G T A G T C A
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CATCATGAAACAA--
-TACTGGAAAAAAAA
 G T A C C T G A A C G T A T G C C G T A A C G T C T A G C T G A C T G A C G T A A T G C C G T A G T C A A C G T A C G T
A C G T G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

JUND/MA0491.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CATCATGAAACAA-
---NATGAGTCACN
 G T A C C T G A A C G T A T G C C G T A A C G T C T A G C T G A C T G A C G T A A T G C C G T A G T C A A C G T
A C G T A C G T A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CATCATGAAACAA
-NACAGGAAAT--
 G T A C C T G A A C G T A T G C C G T A A C G T C T A G C T G A C T G A C G T A A T G C C G T A G T C A
A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CATCATGAAACAA-
--CCATCAATCAAA
 G T A C C T G A A C G T A T G C C G T A A C G T C T A G C T G A C T G A C G T A A T G C C G T A G T C A A C G T
A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

FOS/MA0476.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CATCATGAAACAA-
---NATGAGTCANN
 G T A C C T G A A C G T A T G C C G T A A C G T C T A G C T G A C T G A C G T A A T G C C G T A G T C A A C G T
A C G T A C G T A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A