Information for 10-ACTTGKCRCMAGM (Motif 11)

C T G A A G T C A C G T A C G T A C T G A C T G A G T C C T A G A G T C G T C A C G T A A C T G G T A C
Reverse Opposite:
A C T G A G T C A C G T A C G T A C T G A G T C A C T G G T A C A G T C C G T A C G T A A C T G A G C T
p-value:1e-10
log p-value:-2.357e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.8 +/- 26.3bp
Average Position of motif in Background33.4 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACTTGKCRCMAGM
NNTTGGCANN---
 C T G A A G T C A C G T A C G T A C T G A C T G A G T C C T A G A G T C G T C A C G T A A C T G G T A C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACTTGKCRCMAGM
-NTTGGCANN---
 C T G A A G T C A C G T A C G T A C T G A C T G A G T C C T A G A G T C G T C A C G T A A C T G G T A C
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACTTGKCRCMAGM---
AGCTCGGCGCCAAAAGC
 A C G T C T G A A G T C A C G T A C G T A C T G A C T G A G T C C T A G A G T C G T C A C G T A A C T G G T A C A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACTTGKCRCMAGM---
CCTTCGGCGCCAAAAGG
 A C G T C T G A A G T C A C G T A C G T A C T G A C T G A G T C C T A G A G T C G T C A C G T A A C T G G T A C A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F1/MA0024.3/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACTTGKCRCMAGM
-TTTGGCGCCAAA
 C T G A A G T C A C G T A C G T A C T G A C T G A G T C C T A G A G T C G T C A C G T A A C T G G T A C
A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ACTTGKCRCMAGM
--TTGGCA-----
 C T G A A G T C A C G T A C G T A C T G A C T G A G T C C T A G A G T C G T C A C G T A A C T G G T A C
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACTTGKCRCMAGM
-CTTGGCAA----
 C T G A A G T C A C G T A C G T A C T G A C T G A G T C C T A G A G T C G T C A C G T A A C T G G T A C
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ACTTGKCRCMAGM-
----GTCACATGAY
 C T G A A G T C A C G T A C G T A C T G A C T G A G T C C T A G A G T C G T C A C G T A A C T G G T A C A C G T
A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGKCRCMAGM
NNACTTGCCTT----
 A C G T A C G T C T G A A G T C A C G T A C G T A C T G A C T G A G T C C T A G A G T C G T C A C G T A A C T G G T A C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGKCRCMAGM
GCACGTGTCNNNN--
 A C G T A C G T C T G A A G T C A C G T A C G T A C T G A C T G A G T C C T A G A G T C G T C A C G T A A C T G G T A C
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A A C G T A C G T