Information for 16-CTAAGGTCACTGA (Motif 24)

A G T C A C G T T C G A C G T A C T A G A T C G A C G T A G T C C G T A A G T C C G A T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C T G A C G T A C T G C G T A A T G C A G T C A C G T A C G T C G T A A C T G
p-value:1e-8
log p-value:-1.960e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.6 +/- 15.4bp
Average Position of motif in Background85.6 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:CTAAGGTCACTGA
--AAGGTCAC---
 A G T C A C G T T C G A C G T A C T A G A T C G A C G T A G T C C G T A A G T C C G A T A C T G C G T A
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTAAGGTCACTGA
-TRAGGTCA----
 A G T C A C G T T C G A C G T A C T A G A T C G A C G T A G T C C G T A A G T C C G A T A C T G C G T A
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTAAGGTCACTGA
CAAAGGTCAG---
 A G T C A C G T T C G A C G T A C T A G A T C G A C G T A G T C C G T A A G T C C G A T A C T G C G T A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTAAGGTCACTGA
TCAAGGTCAN---
 A G T C A C G T T C G A C G T A C T A G A T C G A C G T A G T C C G T A A G T C C G A T A C T G C G T A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTAAGGTCACTGA---
--NAGGTCANTGACCT
 A G T C A C G T T C G A C G T A C T A G A T C G A C G T A G T C C G T A A G T C C G A T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CTAAGGTCACTGA
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A G T C A C G T T C G A C G T A C T A G A T C G A C G T A G T C C G T A A G T C C G A T A C T G C G T A
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTAAGGTCACTGA
TCAAGGTCAT---
 A G T C A C G T T C G A C G T A C T A G A T C G A C G T A G T C C G T A A G T C C G A T A C T G C G T A
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTAAGGTCACTGA
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A G T C A C G T T C G A C G T A C T A G A T C G A C G T A G T C C G T A A G T C C G A T A C T G C G T A
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTAAGGTCACTGA
CAAAGGTCAAGGG
 A G T C A C G T T C G A C G T A C T A G A T C G A C G T A G T C C G T A A G T C C G A T A C T G C G T A
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTAAGGTCACTGA
---AGGTCA----
 A G T C A C G T T C G A C G T A C T A G A T C G A C G T A G T C C G T A A G T C C G A T A C T G C G T A
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T