Information for 11-AGGGCTKTTTGTC (Motif 19)

C G T A A C T G A C T G C T A G G A T C C G A T A C T G A C G T A C G T C G A T A C T G A C G T A T G C
Reverse Opposite:
T A C G C G T A G T A C C G T A C G T A T G C A T G A C C G T A C A T G A G T C A G T C A G T C A C G T
p-value:1e-10
log p-value:-2.357e+01
Information Content per bp:1.816
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif18.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets58.6 +/- 25.3bp
Average Position of motif in Background54.6 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGGGCTKTTTGTC
AGGVNCCTTTGT-
 C G T A A C T G A C T G C T A G G A T C C G A T A C T G A C G T A C G T C G A T A C T G A C G T A T G C
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGGGCTKTTTGTC------
---GNNATTTGTCGTAANN
 C G T A A C T G A C T G C T A G G A T C C G A T A C T G A C G T A C G T C G A T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGGGCTKTTTGTC-
VAGRACAKNCTGTBC
 A C G T C G T A A C T G A C T G C T A G G A T C C G A T A C T G A C G T A C G T C G A T A C T G A C G T A T G C A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCTKTTTGTC-
NNNTGGCAGTTGGTNN
 A C G T A C G T C G T A A C T G A C T G C T A G G A T C C G A T A C T G A C G T A C G T C G A T A C T G A C G T A T G C A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AGGGCTKTTTGTC
------CTTTGT-
 C G T A A C T G A C T G C T A G G A T C C G A T A C T G A C G T A C G T C G A T A C T G A C G T A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGGGCTKTTTGTC-
VAGRACAKWCTGTYC
 A C G T C G T A A C T G A C T G C T A G G A T C C G A T A C T G A C G T A C G T C G A T A C T G A C G T A T G C A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AGGGCTKTTTGTC--
-----CCWTTGTYYB
 C G T A A C T G A C T G C T A G G A T C C G A T A C T G A C G T A C G T C G A T A C T G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGGGCTKTTTGTC
----CTCATTGTC
 C G T A A C T G A C T G C T A G G A T C C G A T A C T G A C G T A C G T C G A T A C T G A C G T A T G C
A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCTKTTTGTC-
CACGGCAGTTGGTNN
 A C G T C G T A A C T G A C T G C T A G G A T C C G A T A C T G A C G T A C G T C G A T A C T G A C G T A T G C A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGGGCTKTTTGTC--
-----CCATTGTTNY
 C G T A A C T G A C T G C T A G G A T C C G A T A C T G A C G T A C G T C G A T A C T G A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T