Information for 10-CCAAGATGGCTGC (Motif 17)

A T G C A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A G T C
Reverse Opposite:
A C T G G T A C G T C A A T C G A G T C A G T C C G T A A C G T A G T C A C G T A C G T C T A G A T C G
p-value:1e-10
log p-value:-2.436e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 26.7bp
Average Position of motif in Background30.1 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.89
Offset:1
Orientation:forward strand
Alignment:CCAAGATGGCTGC
-CAAGATGGCGGC
 A T G C A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A G T C
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.87
Offset:1
Orientation:forward strand
Alignment:CCAAGATGGCTGC
-CAAGATGGCGGC
 A T G C A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A G T C
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCAAGATGGCTGC-
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A G T C A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCAAGATGGCTGC
AACAGATGGC---
 A T G C A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCAAGATGGCTGC
-CAAGACGCCTTA
 A T G C A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A G T C
A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCAAGATGGCTGC-
--ATGATKGATGRC
 A T G C A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A G T C A C G T
A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCAAGATGGCTGC-
---TAATGGCGGNC
 A T G C A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCAAGATGGCTGC
AACAGATGGT---
 A T G C A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A G T C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCAAGATGGCTGC--
GACAGAGATATCAGTGT
 A C G T A C G T A T G C A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A G T C A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCAAGATGGCTGC
GTCATGCHTGRCTGS
 A C G T A C G T A T G C A G T C C G T A C G T A A C T G C G T A A C G T A C T G A C T G A T G C A C G T A C T G A G T C
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C