Information for 7-CTWVAGGGCA (Motif 15)

G T A C C A G T C G T A T A G C C T G A C T A G C T A G A T C G G T A C G C T A
Reverse Opposite:
C G A T A C T G A T G C A G T C A G T C A G C T A T C G G C A T G T C A A C T G
p-value:1e-10
log p-value:-2.460e+01
Information Content per bp:1.748
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif263.2
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets48.5 +/- 26.8bp
Average Position of motif in Background46.8 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CTWVAGGGCA-
--TNNGGGCAG
 G T A C C A G T C G T A T A G C C T G A C T A G C T A G A T C G G T A C G C T A A C G T
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTWVAGGGCA
--TRAGGTCA
 G T A C C A G T C G T A T A G C C T G A C T A G C T A G A T C G G T A C G C T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTWVAGGGCA-
GCCTCAGGGCAT
 A C G T G T A C C A G T C G T A T A G C C T G A C T A G C T A G A T C G G T A C G C T A A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CTWVAGGGCA
TGCCCTNAGGGCA
 A C G T A C G T A C G T G T A C C A G T C G T A T A G C C T G A C T A G C T A G A T C G G T A C G C T A
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTWVAGGGCA-----
NNNNTTGGGCACNNCN
 A C G T G T A C C A G T C G T A T A G C C T G A C T A G C T A G A T C G G T A C G C T A A C G T A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTWVAGGGCA-
--NGTGGGCAT
 G T A C C A G T C G T A T A G C C T G A C T A G C T A G A T C G G T A C G C T A A C G T
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTWVAGGGCA-
TCACCTCTGGGCAG
 A C G T A C G T A C G T G T A C C A G T C G T A T A G C C T G A C T A G C T A G A T C G G T A C G C T A A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTWVAGGGCA
TGCCCNNAGGGCA
 A C G T A C G T A C G T G T A C C A G T C G T A T A G C C T G A C T A G C T A G A T C G G T A C G C T A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTWVAGGGCA
TGCCCTNAGGGCA
 A C G T A C G T A C G T G T A C C A G T C G T A T A G C C T G A C T A G C T A G A T C G G T A C G C T A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTWVAGGGCA-
SCCTSAGGSCAW
 A C G T G T A C C A G T C G T A T A G C C T G A C T A G C T A G A T C G G T A C G C T A A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T