Information for 5-YCGCTGTGSTTTG (Motif 9)

A G C T G T A C A C T G A G T C C G A T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C T G
Reverse Opposite:
G T A C G T C A C G T A C G T A A T G C A G T C C G T A A G T C C G T A A C T G A G T C A C T G C T G A
p-value:1e-12
log p-value:-2.821e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.3 +/- 34.5bp
Average Position of motif in Background72.9 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.79
Offset:2
Orientation:forward strand
Alignment:YCGCTGTGSTTTG
--GCTGTGGTTT-
 A G C T G T A C A C T G A G T C C G A T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C T G
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:YCGCTGTGSTTTG
---CTGTGGTTTN
 A G C T G T A C A C T G A G T C C G A T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C T G
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:YCGCTGTGSTTTG
--NNTGTGGTTT-
 A G C T G T A C A C T G A G T C C G A T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C T G
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.75
Offset:1
Orientation:forward strand
Alignment:YCGCTGTGSTTTG
-GTCTGTGGTTT-
 A G C T G T A C A C T G A G T C C G A T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C T G
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:YCGCTGTGSTTTG
-TGCTGTGATTT-
 A G C T G T A C A C T G A G T C C G A T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C T G
A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:YCGCTGTGSTTTG
-NNHTGTGGTTWN
 A G C T G T A C A C T G A G T C C G A T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C T G
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:YCGCTGTGSTTTG
--GCAGTGATTT-
 A G C T G T A C A C T G A G T C C G A T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C T G
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:YCGCTGTGSTTTG
--GCTGTG-----
 A G C T G T A C A C T G A G T C C G A T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C T G
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:YCGCTGTGSTTTG--
----TGTGGATTNNN
 A G C T G T A C A C T G A G T C C G A T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:YCGCTGTGSTTTG
---CNGTGATTTN
 A G C T G T A C A C T G A G T C C G A T A C T G A C G T A C T G A T C G A C G T A C G T A C G T A C T G
A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G