Information for 14-AAAGTACTCAGTA (Motif 33)

G C T A C G T A C G T A A T C G C G A T C G T A A G T C C G A T A T G C C G T A A C T G A C G T C T G A
Reverse Opposite:
G A C T C G T A A G T C C G A T A T C G C G T A A C T G A C G T G C T A A T G C A C G T G C A T C G A T
p-value:1e-4
log p-value:-1.040e+01
Information Content per bp:1.796
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif42.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets66.7 +/- 22.6bp
Average Position of motif in Background46.3 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0117.1_Nkx3-1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----AAAGTACTCAGTA
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T G C T A C G T A C G T A A T C G C G A T C G T A A G T C C G A T A T G C C G T A A C T G A C G T C T G A
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AAAGTACTCAGTA-
TTCNAAGTACTTNNNNN
 A C G T A C G T A C G T G C T A C G T A C G T A A T C G C G A T C G T A A G T C C G A T A T G C C G T A A C T G A C G T C T G A A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAAGTACTCAGTA
-AAGCACTTAA--
 G C T A C G T A C G T A A T C G C G A T C G T A A G T C C G A T A T G C C G T A A C T G A C G T C T G A
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAAGTACTCAGTA
CTTTAAGTACTTAATG
 A C G T A C G T A C G T G C T A C G T A C G T A A T C G C G A T C G T A A G T C C G A T A T G C C G T A A C T G A C G T C T G A
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PH0116.1_Nkx2-9/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AAAGTACTCAGTA
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A C G T G C T A C G T A C G T A A T C G C G A T C G T A A G T C C G A T A T G C C G T A A C T G A C G T C T G A
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAAGTACTCAGTA-
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T G C T A C G T A C G T A A T C G C G A T C G T A A G T C C G A T A T G C C G T A A C T G A C G T C T G A A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAAGTACTCAGTA-
--ATGACTCAGCAD
 G C T A C G T A C G T A A T C G C G A T C G T A A G T C C G A T A T G C C G T A A C T G A C G T C T G A A C G T
A C G T A C G T T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAAGTACTCAGTA
AAAGTAAACA---
 G C T A C G T A C G T A A T C G C G A T C G T A A G T C C G A T A T G C C G T A A C T G A C G T C T G A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAAGTACTCAGTA
AAAGTAAACA---
 G C T A C G T A C G T A A T C G C G A T C G T A A G T C C G A T A T G C C G T A A C T G A C G T C T G A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAAGTACTCAGTA
-GATGACTCAGCA
 G C T A C G T A C G T A A T C G C G A T C G T A A G T C C G A T A T G C C G T A A C T G A C G T C T G A
A C G T T A C G T C G A C A G T A C T G G C T A A T G C C G A T G T A C C G T A A C T G T A G C C G T A