Information for 9-TCATCAAAGCCAA (Motif 21)

A C G T G T A C C G T A A G C T A G T C G T C A C G T A C G T A C T A G A G T C G T A C C G T A G T C A
Reverse Opposite:
A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C T G C T G A C G A T A C T G C G T A
p-value:1e-9
log p-value:-2.087e+01
Information Content per bp:1.819
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif21.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets57.5 +/- 21.9bp
Average Position of motif in Background49.8 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0082.1_Tcf3_1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TCATCAAAGCCAA-
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T G T A C C G T A A G C T A G T C G T C A C G T A C G T A C T A G A G T C G T A C C G T A G T C A A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCATCAAAGCCAA-
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T G T A C C G T A A G C T A G T C G T C A C G T A C G T A C T A G A G T C G T A C C G T A G T C A A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCATCAAAGCCAA-
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T G T A C C G T A A G C T A G T C G T C A C G T A C G T A C T A G A G T C G T A C C G T A G T C A A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCATCAAAGCCAA
AAAGATCAAAGGAA-
 A C G T A C G T A C G T G T A C C G T A A G C T A G T C G T C A C G T A C G T A C T A G A G T C G T A C C G T A G T C A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCATCAAAGCCAA
ACATCAAAGGNA-
 A C G T G T A C C G T A A G C T A G T C G T C A C G T A C G T A C T A G A G T C G T A C C G T A G T C A
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCATCAAAGCCAA
ACATCAAAGG---
 A C G T G T A C C G T A A G C T A G T C G T C A C G T A C G T A C T A G A G T C G T A C C G T A G T C A
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCATCAAAGCCAA---
ATATCAAAACAAAACA
 A C G T G T A C C G T A A G C T A G T C G T C A C G T A C G T A C T A G A G T C G T A C C G T A G T C A A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCATCAAAGCCAA---
AACACCAAAACAAAGGA
 A C G T A C G T G T A C C G T A A G C T A G T C G T C A C G T A C G T A C T A G A G T C G T A C C G T A G T C A A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0036.1_Irf6_1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCATCAAAGCCAA---
CTGATCGAAACCAAAGT
 A C G T A C G T G T A C C G T A A G C T A G T C G T C A C G T A C G T A C T A G A G T C G T A C C G T A G T C A A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCATCAAAGCCAA
ATAAACCGAAACCAA
 A C G T A C G T A C G T G T A C C G T A A G C T A G T C G T C A C G T A C G T A C T A G A G T C G T A C C G T A G T C A
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A