Information for 9-AAGMMAAAAYTAAAAA (Motif 13)

C G T A T C G A A C T G G T C A G T C A G T C A C G T A C G T A C G T A A G C T A C G T T G C A C G T A C G T A C T G A C G T A
Reverse Opposite:
A C G T A G C T A C G T A C G T A C G T C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T G T A C A G C T C G A T
p-value:1e-11
log p-value:-2.627e+01
Information Content per bp:1.787
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 22.6bp
Average Position of motif in Background29.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:AAGMMAAAAYTAAAAA
-------NATTCAAAT
 C G T A T C G A A C T G G T C A G T C A G T C A C G T A C G T A C G T A A G C T A C G T T G C A C G T A C G T A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AAGMMAAAAYTAAAAA-
-----GAAAMTGAAACT
 C G T A T C G A A C T G G T C A G T C A G T C A C G T A C G T A C G T A A G C T A C G T T G C A C G T A C G T A C T G A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

IRF7/MA0772.1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AAGMMAAAAYTAAAAA-
---ACGAAAGCGAAAGT
 C G T A T C G A A C T G G T C A G T C A G T C A C G T A C G T A C G T A A G C T A C G T T G C A C G T A C G T A C T G A C G T A A C G T
A C G T A C G T A C G T G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AAGMMAAAAYTAAAAA
-----AAAAGTCAA--
 C G T A T C G A A C T G G T C A G T C A G T C A C G T A C G T A C G T A A G C T A C G T T G C A C G T A C G T A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AAGMMAAAAYTAAAAA-
-----GAAAGTGAAAGT
 C G T A T C G A A C T G G T C A G T C A G T C A C G T A C G T A C G T A A G C T A C G T T G C A C G T A C G T A C T G A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AAGMMAAAAYTAAAAA
------AAAGTAAACA
 C G T A T C G A A C T G G T C A G T C A G T C A C G T A C G T A C G T A A G C T A C G T T G C A C G T A C G T A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

ONECUT3/MA0757.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAGMMAAAAYTAAAAA--
----AAAAAATCAATAAT
 C G T A T C G A A C T G G T C A G T C A G T C A C G T A C G T A C G T A A G C T A C G T T G C A C G T A C G T A C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AAGMMAAAAYTAAAAA-
-----GAAASYGAAASY
 C G T A T C G A A C T G G T C A G T C A G T C A C G T A C G T A C G T A A G C T A C G T T G C A C G T A C G T A C T G A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AAGMMAAAAYTAAAAA
------AAAGTAAACA
 C G T A T C G A A C T G G T C A G T C A G T C A C G T A C G T A C G T A A G C T A C G T T G C A C G T A C G T A C T G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAGMMAAAAYTAAAAA-----
AAANNGAAAGTGAAAGTAAAN
 C G T A T C G A A C T G G T C A G T C A G T C A C G T A C G T A C G T A A G C T A C G T T G C A C G T A C G T A C T G A C G T A A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A