Information for 6-TTCCCCAARGGMACAG (Motif 5)

A C G T C G A T G T A C A G T C A G T C G A T C G C T A C G T A C T A G A C T G T A C G G T C A G T C A G T A C G C T A C T A G
Reverse Opposite:
A G T C C G A T A C T G C A G T A C G T A T G C A G T C A G T C G C A T C G A T C A T G C T A G A C T G A C T G C G T A G T C A
p-value:1e-15
log p-value:-3.656e+01
Information Content per bp:1.674
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.82%
Number of Background Sequences with motif107.9
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets39.8 +/- 17.2bp
Average Position of motif in Background50.0 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTCCCCAARGGMACAG
GTCCCCAGGGGA----
 A C G T C G A T G T A C A G T C A G T C G A T C G C T A C G T A C T A G A C T G T A C G G T C A G T C A G T A C G C T A C T A G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTCCCCAARGGMACAG
-TGCCCCAGGGCA---
 A C G T C G A T G T A C A G T C A G T C G A T C G C T A C G T A C T A G A C T G T A C G G T C A G T C A G T A C G C T A C T A G
A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTCCCCAARGGMACAG
-TGCCCCAGGGCA---
 A C G T C G A T G T A C A G T C A G T C G A T C G C T A C G T A C T A G A C T G T A C G G T C A G T C A G T A C G C T A C T A G
A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTCCCCAARGGMACAG
-TGCCCCCGGGCA---
 A C G T C G A T G T A C A G T C A G T C G A T C G C T A C G T A C T A G A C T G T A C G G T C A G T C A G T A C G C T A C T A G
A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTCCCCAARGGMACAG
TTGCCCTAGGGCAT--
 A C G T C G A T G T A C A G T C A G T C G A T C G C T A C G T A C T A G A C T G T A C G G T C A G T C A G T A C G C T A C T A G
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTCCCCAARGGMACAG
GTTGCCATGGCAAC--
 A C G T C G A T G T A C A G T C A G T C G A T C G C T A C G T A C T A G A C T G T A C G G T C A G T C A G T A C G C T A C T A G
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTCCCCAARGGMACAG
-TCCCCA---------
 A C G T C G A T G T A C A G T C A G T C G A T C G C T A C G T A C T A G A C T G T A C G G T C A G T C A G T A C G C T A C T A G
A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTCCCCAARGGMACAG
ATTCCCTGAGGGGAA--
 A C G T A C G T C G A T G T A C A G T C A G T C G A T C G C T A C G T A C T A G A C T G T A C G G T C A G T C A G T A C G C T A C T A G
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTCCCCAARGGMACAG
-TTGCCATGGCAACN-
 A C G T C G A T G T A C A G T C A G T C G A T C G C T A C G T A C T A G A C T G T A C G G T C A G T C A G T A C G C T A C T A G
A C G T A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T

EBF1/MA0154.3/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTCCCCAARGGMACAG
ATTCCCAAGGGAAT--
 A C G T C G A T G T A C A G T C A G T C G A T C G C T A C G T A C T A G A C T G T A C G G T C A G T C A G T A C G C T A C T A G
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T A C G T A C G T