Information for 24-TGGGAGCTTCTGSRSC (Motif 35)

A C G T T A C G C T A G A T C G C T G A A C T G A G T C A G C T A C G T A G T C A C G T A C T G A T G C C T G A T A G C A G T C
Reverse Opposite:
T C A G A T C G A G C T A T C G G T A C C G T A A C T G C G T A C T G A A C T G A G T C G A C T A T G C A G T C A G T C G T C A
p-value:1e-7
log p-value:-1.675e+01
Information Content per bp:1.753
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.0 +/- 17.7bp
Average Position of motif in Background69.5 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TGGGAGCTTCTGSRSC
-----GCTTCC-----
 A C G T T A C G C T A G A T C G C T G A A C T G A G T C A G C T A C G T A G T C A C G T A C T G A T G C C T G A T A G C A G T C
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGGAGCTTCTGSRSC
-CGGAGC---------
 A C G T T A C G C T A G A T C G C T G A A C T G A G T C A G C T A C G T A G T C A C G T A C T G A T G C C T G A T A G C A G T C
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGGGAGCTTCTGSRSC
NNTTCTGGAANNTTCTAGAA-
 A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T C G C T G A A C T G A G T C A G C T A C G T A G T C A C G T A C T G A T G C C T G A T A G C A G T C
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TGGGAGCTTCTGSRSC
----AACATCTGGA--
 A C G T T A C G C T A G A T C G C T G A A C T G A G T C A G C T A C G T A G T C A C G T A C T G A T G C C T G A T A G C A G T C
A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGGGAGCTTCTGSRSC
ADGGYAGYAGCATCT-----
 A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T C G C T G A A C T G A G T C A G C T A C G T A G T C A C G T A C T G A T G C C T G A T A G C A G T C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGGAGCTTCTGSRSC-
CCNNACCATCTGGCCTN
 A C G T T A C G C T A G A T C G C T G A A C T G A G T C A G C T A C G T A G T C A C G T A C T G A T G C C T G A T A G C A G T C A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGGGAGCTTCTGSRSC
---VBSYGTCTGG---
 A C G T T A C G C T A G A T C G C T G A A C T G A G T C A G C T A C G T A G T C A C G T A C T G A T G C C T G A T A G C A G T C
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGGGAGCTTCTGSRSC
----ANCAGCTG----
 A C G T T A C G C T A G A T C G C T G A A C T G A G T C A G C T A C G T A G T C A C G T A C T G A T G C C T G A T A G C A G T C
A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGGGAGCTTCTGSRSC-
-CNNNGCTACTGTANNN
 A C G T T A C G C T A G A T C G C T G A A C T G A G T C A G C T A C G T A G T C A C G T A C T G A T G C C T G A T A G C A G T C A C G T
A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGGGAGCTTCTGSRSC
-AGCAGCTGCT-----
 A C G T T A C G C T A G A T C G C T G A A C T G A G T C A G C T A C G T A G T C A C G T A C T G A T G C C T G A T A G C A G T C
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T