Information for 16-CTAAAAAAGGAAA (Motif 30)

A G T C C G A T C G T A C G T A C G T A C G T A C T G A C T G A C T A G A C T G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T G T A C A G T C A G C T A G C T A C G T A C G T A C G T C G A T C G T A A C T G
p-value:1e-8
log p-value:-1.943e+01
Information Content per bp:1.896
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets63.7 +/- 25.2bp
Average Position of motif in Background6.2 +/- 0.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTAAAAAAGGAAA---
--GAGAACCGAAACTG
 A G T C C G A T C G T A C G T A C G T A C G T A C T G A C T G A C T A G A C T G C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CTAAAAAAGGAAA--
---GAAAMTGAAACT
 A G T C C G A T C G T A C G T A C G T A C G T A C T G A C T G A C T A G A C T G C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTAAAAAAGGAAA--
---AAAGRGGAAGTG
 A G T C C G A T C G T A C G T A C G T A C G T A C T G A C T G A C T A G A C T G C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTAAAAAAGGAAA----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C C G A T C G T A C G T A C G T A C G T A C T G A C T G A C T A G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTAAAAAAGGAAA----
NNCCTGNAAAAAAAAAAAAA
 A C G T A C G T A C G T A G T C C G A T C G T A C G T A C G T A C G T A C T G A C T G A C T A G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTAAAAAAGGAAA--
---AGAAACGAAAGT
 A G T C C G A T C G T A C G T A C G T A C G T A C T G A C T G A C T A G A C T G C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTAAAAAAGGAAA----
--GGAAANTGAAACTNA
 A G T C C G A T C G T A C G T A C G T A C G T A C T G A C T G A C T A G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

SPIC/MA0687.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTAAAAAAGGAAA--
-AAAAAGAGGAAGTA
 A G T C C G A T C G T A C G T A C G T A C G T A C T G A C T G A C T A G A C T G C G T A C G T A C G T A A C G T A C G T
A C G T G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

PRDM1/MA0508.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTAAAAAAGGAAA----
--AGAAAGTGAAAGTGA
 A G T C C G A T C G T A C G T A C G T A C G T A C T G A C T G A C T A G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTAAAAAAGGAAA--
---GAAASYGAAASY
 A G T C C G A T C G T A C G T A C G T A C G T A C T G A C T G A C T A G A C T G C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T