Information for 15-CATCTGGCTGACA (Motif 29)

G A T C C T G A A C G T A T G C C G A T A C T G T C A G A T G C C G A T A C T G T C G A T G A C C G T A
Reverse Opposite:
G C A T A C T G A G C T G T A C C G T A A T C G A G T C A G T C C G T A A T C G G T C A A G C T C A T G
p-value:1e-8
log p-value:-1.968e+01
Information Content per bp:1.698
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.69%
Number of Background Sequences with motif241.6
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets42.2 +/- 23.0bp
Average Position of motif in Background54.3 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CATCTGGCTGACA--
---BTGABTGACAGS
 G A T C C T G A A C G T A T G C C G A T A C T G T C A G A T G C C G A T A C T G T C G A T G A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CATCTGGCTGACA---
---CTGTCTGTCACCT
 G A T C C T G A A C G T A T G C C G A T A C T G T C A G A T G C C G A T A C T G T C G A T G A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CATCTGGCTGACA--
---NTGATTGACAGN
 G A T C C T G A A C G T A T G C C G A T A C T G T C A G A T G C C G A T A C T G T C G A T G A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CATCTGGCTGACA---
----TGTCTGDCACCT
 G A T C C T G A A C G T A T G C C G A T A C T G T C A G A T G C C G A T A C T G T C G A T G A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CATCTGGCTGACA---
----TGAGTGACAGSC
 G A T C C T G A A C G T A T G C C G A T A C T G T C A G A T G C C G A T A C T G T C G A T G A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.68
Offset:5
Orientation:forward strand
Alignment:CATCTGGCTGACA--
-----VGCTGWCAVB
 G A T C C T G A A C G T A T G C C G A T A C T G T C A G A T G C C G A T A C T G T C G A T G A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CATCTGGCTGACA
---TWGTCTGV--
 G A T C C T G A A C G T A T G C C G A T A C T G T C A G A T G C C G A T A C T G T C G A T G A C C G T A
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CATCTGGCTGACA
---CTGTCTGG--
 G A T C C T G A A C G T A T G C C G A T A C T G T C A G A T G C C G A T A C T G T C G A T G A C C G T A
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CATCTGGCTGACA
GGTCTGGCAT---
 G A T C C T G A A C G T A T G C C G A T A C T G T C A G A T G C C G A T A C T G T C G A T G A C C G T A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CATCTGGCTGACA-
------RHTGWCAR
 G A T C C T G A A C G T A T G C C G A T A C T G T C A G A T G C C G A T A C T G T C G A T G A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A