Information for 11-TGCTCTCTTGCAA (Motif 20)

A C G T A C T G A G T C A C G T A G T C A C G T G A T C A C G T C G A T A C T G A G T C C G T A G T C A
Reverse Opposite:
C A G T A C G T A C T G A G T C C G T A G T C A C A T G C G T A C T A G C G T A A C T G A G T C C G T A
p-value:1e-10
log p-value:-2.327e+01
Information Content per bp:1.902
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.6 +/- 21.0bp
Average Position of motif in Background38.0 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BCL6B/MA0731.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGCTCTCTTGCAA----
TGCTTTCTAGGAATTCA
 A C G T A C T G A G T C A C G T A G T C A C G T G A T C A C G T C G A T A C T G A G T C C G T A G T C A A C G T A C G T A C G T A C G T
A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

Bcl6/MA0463.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGCTCTCTTGCAA-
NGCTTTCTAGGAAN
 A C G T A C T G A G T C A C G T A G T C A C G T G A T C A C G T C G A T A C T G A G T C C G T A G T C A A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCTCTCTTGCAA-
NNNCTTTCCAGGAAA
 A C G T A C G T A C T G A G T C A C G T A G T C A C G T G A T C A C G T C G A T A C T G A G T C C G T A G T C A A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

PB0006.1_Bcl6b_1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGCTCTCTTGCAA----
-TCTTTCGAGGAATTTG
 A C G T A C T G A G T C A C G T A G T C A C G T G A T C A C G T C G A T A C T G A G T C C G T A G T C A A C G T A C G T A C G T A C G T
A C G T C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGCTCTCTTGCAA--
TGTTKCCTAGCAACM
 A C G T A C T G A G T C A C G T A G T C A C G T G A T C A C G T C G A T A C T G A G T C C G T A G T C A A C G T A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGCTCTCTTGCAA---
-ANATTTTTGCAANTN
 A C G T A C T G A G T C A C G T A G T C A C G T G A T C A C G T C G A T A C T G A G T C C G T A G T C A A C G T A C G T A C G T
A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGCTCTCTTGCAA
---NATGTTGCAA
 A C G T A C T G A G T C A C G T A G T C A C G T G A T C A C G T C G A T A C T G A G T C C G T A G T C A
A C G T A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGCTCTCTTGCAA--
--CTGTCTGTCACCT
 A C G T A C T G A G T C A C G T A G T C A C G T G A T C A C G T C G A T A C T G A G T C C G T A G T C A A C G T A C G T
A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGCTCTCTTGCAA--------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C T G A G T C A C G T A G T C A C G T G A T C A C G T C G A T A C T G A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGCTCTCTTGCAA--
----TTCTTGGAAAN
 A C G T A C T G A G T C A C G T A G T C A C G T G A T C A C G T C G A T A C T G A G T C C G T A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T