Information for 2-CGTCACVAGW (Motif 5)

A T G C C T A G C G A T A G T C C G T A A G T C T A G C C T G A A C T G C G T A
Reverse Opposite:
G C A T A G T C A G C T A T C G C T A G A C G T A C T G C G T A G A T C T A C G
p-value:1e-13
log p-value:-3.202e+01
Information Content per bp:1.719
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif434.8
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets55.5 +/- 27.6bp
Average Position of motif in Background49.6 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:CGTCACVAGW-
-GTCACATGAY
 A T G C C T A G C G A T A G T C C G T A A G T C T A G C C T G A A C T G C G T A A C G T
A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

Mitf/MA0620.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CGTCACVAGW
GGTCACGTGG
 A T G C C T A G C G A T A G T C C G T A A G T C T A G C C T G A A C T G C G T A
C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CGTCACVAGW-
-GTCACGTGGT
 A T G C C T A G C G A T A G T C C G T A A G T C T A G C C T G A A C T G C G T A A C G T
A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

TFEC/MA0871.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGTCACVAGW-
-ATCACGTGAC
 A T G C C T A G C G A T A G T C C G T A A G T C T A G C C T G A A C T G C G T A A C G T
A C G T T C G A C A G T G T A C C G T A A G T C T C A G G A C T A C T G T C G A A G T C

TFE3/MA0831.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGTCACVAGW-
-GTCACGTGNT
 A T G C C T A G C G A T A G T C C G T A A G T C T A G C C T G A A C T G C G T A A C G T
A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

Arntl/MA0603.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGTCACVAGW
GGTCACGTGC
 A T G C C T A G C G A T A G T C C G T A A G T C T A G C C T G A A C T G C G T A
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

TFEB/MA0692.1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CGTCACVAGW-
-GTCACGTGAT
 A T G C C T A G C G A T A G T C C G T A A G T C T A G C C T G A A C T G C G T A A C G T
A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

Atf1/MA0604.1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CGTCACVAGW
TACGTCAT----
 A C G T A C G T A T G C C T A G C G A T A G T C C G T A A G T C T A G C C T G A A C T G C G T A
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T A C G T A C G T

Atf3/MA0605.1/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CGTCACVAGW
ACGTCATC---
 A C G T A T G C C T A G C G A T A G T C C G T A A G T C T A G C C T G A A C T G C G T A
C T G A G A T C A C T G A C G T G T A C C G T A A G C T A T G C A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CGTCACVAGW
ACGTCA-----
 A C G T A T G C C T A G C G A T A G T C C G T A A G T C T A G C C T G A A C T G C G T A
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T