p-value: | 1e-35 |
log p-value: | -8.264e+01 |
Information Content per bp: | 1.721 |
Number of Target Sequences with motif | 21.0 |
Percentage of Target Sequences with motif | 15.44% |
Number of Background Sequences with motif | 65.6 |
Percentage of Background Sequences with motif | 0.14% |
Average Position of motif in Targets | 55.0 +/- 19.6bp |
Average Position of motif in Background | 53.1 +/- 27.5bp |
Strand Bias (log2 ratio + to - strand density) | -0.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 1 |
Score: | 0.79 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTTGCTAGGCAGA CTGTTGCTAGGS--- |
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PB0056.1_Rfxdc2_1/Jaspar
Match Rank: | 2 |
Score: | 0.75 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTTGCTAGGCAGA NCCGTTGCTANGNGN- |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 3 |
Score: | 0.72 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTTGCTAGGCAGA NNCGTTGCTATGGNN- |
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Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
Match Rank: | 4 |
Score: | 0.72 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GTTGCTAGGCAGA- KGTTGCTAGGMAACA |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 5 |
Score: | 0.70 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------GTTGCTAGGCAGA--- NTNNNNNGTTGCTANGGNNCANA |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 6 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTTGCTAGGCAGA- GTTGCCATGGNAAC |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 7 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GTTGCTAGGCAGA -WDNCTGGGCA-- |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 8 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTTGCTAGGCAGA NGTTGCCATGGCAA |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 9 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTTGCTAGGCAGA GGTTGCCATGGCAA |
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PB0159.1_Rfx4_2/Jaspar
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTTGCTAGGCAGA NNNGTAACTANGNNA- |
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