Information for 1-TGCCCAGCAACWGATG (Motif 1)

A G C T T A C G G T A C A G T C A G T C C T G A A C T G A G T C C G T A C G T A A G T C G C A T A C T G C T G A A C G T C T A G
Reverse Opposite:
A G T C G T C A A G C T G T A C C G T A A C T G A C G T A C G T A C T G A G T C A G C T C T A G C T A G A C T G A T G C C T G A
p-value:1e-34
log p-value:-7.889e+01
Information Content per bp:1.797
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif11.46%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.8 +/- 25.0bp
Average Position of motif in Background34.9 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:TGCCCAGCAACWGATG
-SCCTAGCAACAG---
 A G C T T A C G G T A C A G T C A G T C C T G A A C T G A G T C C G T A C G T A A G T C G C A T A C T G C T G A A C G T C T A G
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TGCCCAGCAACWGATG
TGTTKCCTAGCAACM----
 A C G T A C G T A C G T A G C T T A C G G T A C A G T C A G T C C T G A A C T G A G T C C G T A C G T A A G T C G C A T A C T G C T G A A C G T C T A G
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGCCCAGCAACWGATG
CCGCATAGCAACGGA--
 A C G T A G C T T A C G G T A C A G T C A G T C C T G A A C T G A G T C C G T A C G T A A G T C G C A T A C T G C T G A A C G T C T A G
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGCCCAGCAACWGATG
TACCATAGCAACGGT--
 A C G T A G C T T A C G G T A C A G T C A G T C C T G A A C T G A G T C C G T A C G T A A G T C G C A T A C T G C T G A A C G T C T A G
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TGCCCAGCAACWGATG--
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A G C T T A C G G T A C A G T C A G T C C T G A A C T G A G T C C G T A C G T A A G T C G C A T A C T G C T G A A C G T C T A G A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

SCRT1/MA0743.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TGCCCAGCAACWGATG---
----GAGCAACAGGTGGTT
 A G C T T A C G G T A C A G T C A G T C C T G A A C T G A G T C C G T A C G T A A G T C G C A T A C T G C T G A A C G T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

SCRT2/MA0744.1/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TGCCCAGCAACWGATG-
----ATGCAACAGGTGG
 A G C T T A C G G T A C A G T C A G T C C T G A A C T G A G T C C G T A C G T A A G T C G C A T A C T G C T G A A C G T C T A G A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCCCAGCAACWGATG
TGCCCAGNHW------
 A G C T T A C G G T A C A G T C A G T C C T G A A C T G A G T C C G T A C G T A A G T C G C A T A C T G C T G A A C G T C T A G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGCCCAGCAACWGATG
GTTGCCATGGCAAC-----
 A C G T A C G T A C G T A G C T T A C G G T A C A G T C A G T C C T G A A C T G A G T C C G T A C G T A A G T C G C A T A C T G C T G A A C G T C T A G
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:TGCCCAGCAACWGATG--
--------AACAGATGGT
 A G C T T A C G G T A C A G T C A G T C C T G A A C T G A G T C C G T A C G T A A G T C G C A T A C T G C T G A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T