Information for 9-TGCTCCAGGCAGA (Motif 8)

C G A T A T C G G T A C A G C T A T G C A G T C C G T A A C T G C T A G A G T C C G T A C T A G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G A G T C T A G C A C G T A C T G A T C G C T G A A C T G A T G C C G T A
p-value:1e-12
log p-value:-2.904e+01
Information Content per bp:1.818
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.1 +/- 31.9bp
Average Position of motif in Background49.1 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TGCTCCAGGCAGA
----CCAGACAG-
 C G A T A T C G G T A C A G C T A T G C A G T C C G T A A C T G C T A G A G T C C G T A C T A G C G T A
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGCTCCAGGCAGA---
CAAATCCAGACATCACA
 A C G T C G A T A T C G G T A C A G C T A T G C A G T C C G T A A C T G C T A G A G T C C G T A C T A G C G T A A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCTCCAGGCAGA
AGCCTCAGGCA--
 C G A T A T C G G T A C A G C T A T G C A G T C C G T A A C T G C T A G A G T C C G T A C T A G C G T A
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCTCCAGGCAGA
CGCCTCAGGCA--
 C G A T A T C G G T A C A G C T A T G C A G T C C G T A A C T G C T A G A G T C C G T A C T A G C G T A
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGCTCCAGGCAGA-
----CCAGACRSVB
 C G A T A T C G G T A C A G C T A T G C A G T C C G T A A C T G C T A G A G T C C G T A C T A G C G T A A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGCTCCAGGCAGA
AGCCTCAGGCA--
 C G A T A T C G G T A C A G C T A T G C A G T C C G T A A C T G C T A G A G T C C G T A C T A G C G T A
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGCTCCAGGCAGA
CGCCCCCTGACA--
 A C G T C G A T A T C G G T A C A G C T A T G C A G T C C G T A A C T G C T A G A G T C C G T A C T A G C G T A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGCTCCAGGCAGA
----BCAGACWA-
 C G A T A T C G G T A C A G C T A T G C A G T C C G T A A C T G C T A G A G T C C G T A C T A G C G T A
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGCTCCAGGCAGA
NTNGCCTCAGGCNNN
 A C G T A C G T C G A T A T C G G T A C A G C T A T G C A G T C C G T A A C T G C T A G A G T C C G T A C T A G C G T A
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGCTCCAGGCAGA
NTCGCCTCAGGCAAT
 A C G T A C G T C G A T A T C G G T A C A G C T A T G C A G T C C G T A A C T G C T A G A G T C C G T A C T A G C G T A
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T