Information for 13-CCGGGTTTTC (Motif 35)

A G T C A G T C A C T G A C T G A T C G C G A T A C G T A C G T A C G T A G T C
Reverse Opposite:
C T A G C G T A C G T A C G T A C G T A A T G C A G T C A G T C A C T G A C T G
p-value:1e-7
log p-value:-1.617e+01
Information Content per bp:1.922
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif23.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets60.6 +/- 23.7bp
Average Position of motif in Background59.6 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CCGGGTTTTC-
-GGGGATTTCC
 A G T C A G T C A C T G A C T G A T C G C G A T A C G T A C G T A C G T A G T C A C G T
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCGGGTTTTC-
-GGGGATTTCC
 A G T C A G T C A C T G A C T G A T C G C G A T A C G T A C G T A C G T A G T C A C G T
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCGGGTTTTC-
-GGGAATTTCC
 A G T C A G T C A C T G A C T G A T C G C G A T A C G T A C G T A C G T A G T C A C G T
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

PB0077.1_Spdef_1/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CCGGGTTTTC
GTACATCCGGATTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G A T C G C G A T A C G T A C G T A C G T A G T C
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

ELF1/MA0473.2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CCGGGTTTTC
NACTTCCGGGTT---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G A T C G C G A T A C G T A C G T A C G T A G T C
A G T C C T G A G A T C C G A T A G C T A G T C A G T C A C T G A T C G C A T G C G A T G C A T A C G T A C G T A C G T

ELF4/MA0641.1/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CCGGGTTTTC
CACTTCCGGGTT---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G A T C G C G A T A C G T A C G T A C G T A G T C
G A T C T C G A A G T C C A G T G A C T G T A C A G T C A C T G A T C G C A T G C G A T G C A T A C G T A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCGGGTTTTC
NAAACCGGTTTT--
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G A T C G C G A T A C G T A C G T A C G T A G T C
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCGGGTTTTC
-NGGGATTA-
 A G T C A G T C A C T G A C T G A T C G C G A T A C G T A C G T A C G T A G T C
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CCGGGTTTTC
TACATCCGGGT----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G A T C G C G A T A C G T A C G T A C G T A G T C
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCGGGTTTTC
AAACCGGTTT---
 A C G T A C G T A C G T A G T C A G T C A C T G A C T G A T C G C G A T A C G T A C G T A C G T A G T C
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T A C G T A C G T