Information for 16-TTAAAATTAAAYACCY (Motif 22)

G A C T G C A T C G T A T C G A T C G A C T G A C G A T C G A T C G T A T C G A C T G A G A C T G C T A A G T C A G T C G A T C
Reverse Opposite:
C T A G C T A G T A C G C G A T C T G A A G C T A G C T G A C T G C T A G C T A G A C T A G C T A G C T G C A T C G T A C G T A
p-value:1e-8
log p-value:-2.063e+01
Information Content per bp:1.567
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.32%
Number of Background Sequences with motif161.5
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets49.8 +/- 27.1bp
Average Position of motif in Background46.2 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TTAAAATTAAAYACCY
-----ATTAAA-----
 G A C T G C A T C G T A T C G A T C G A C T G A C G A T C G A T C G T A T C G A C T G A G A C T G C T A A G T C A G T C G A T C
A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TTAAAATTAAAYACCY
---AAATTAATTAATC
 G A C T G C A T C G T A T C G A T C G A C T G A C G A T C G A T C G T A T C G A C T G A G A C T G C T A A G T C A G T C G A T C
A C G T A C G T A C G T C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C

Hoxd9/MA0913.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTAAAATTAAAYACCY
--GCAATAAAAA----
 G A C T G C A T C G T A T C G A T C G A C T G A C G A T C G A T C G T A T C G A C T G A G A C T G C T A A G T C A G T C G A T C
A C G T A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T A C G T A C G T

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTAAAATTAAAYACCY--
-GAAAATTAATTACTTCG
 G A C T G C A T C G T A T C G A T C G A C T G A C G A T C G A T C G T A T C G A C T G A G A C T G C T A A G T C A G T C G A T C A C G T A C G T
A C G T C T A G T G C A G C T A C G T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A G T A C G A C T A G C T A G T C A T C G

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTAAAATTAAAYACCY
GGTTAAACATTAA------
 A C G T A C G T A C G T G A C T G C A T C G T A T C G A T C G A C T G A C G A T C G A T C G T A T C G A C T G A G A C T G C T A A G T C A G T C G A T C
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTAAAATTAAAYACCY
----AAATAAACA---
 G A C T G C A T C G T A T C G A T C G A C T G A C G A T C G A T C G T A T C G A C T G A G A C T G C T A A G T C A G T C G A T C
A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTAAAATTAAAYACCY--
--NNAATTAATGACCNNN
 G A C T G C A T C G T A T C G A T C G A C T G A C G A T C G A T C G T A T C G A C T G A G A C T G C T A A G T C A G T C G A T C A C G T A C G T
A C G T A C G T T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

PB0001.1_Arid3a_1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTAAAATTAAAYACCY
NNNTTTTAATTAANNNN--
 A C G T A C G T A C G T G A C T G C A T C G T A T C G A T C G A C T G A C G A T C G A T C G T A T C G A C T G A G A C T G C T A A G T C A G T C G A T C
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTAAAATTAAAYACCY
ATAAACAATTAAACA---
 A C G T A C G T G A C T G C A T C G T A T C G A T C G A C T G A C G A T C G A T C G T A T C G A C T G A G A C T G C T A A G T C A G T C G A T C
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTAAAATTAAAYACCY
---AAAGTAAACA---
 G A C T G C A T C G T A T C G A T C G A C T G A C G A T C G A T C G T A T C G A C T G A G A C T G C T A A G T C A G T C G A T C
A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T