Information for 6-CGGGAGCCCGCCT (Motif 8)

T A G C A T C G A T C G T A C G G T C A A T C G A T G C A T G C A T G C A C T G A T G C T A G C G A C T
Reverse Opposite:
C T G A A T C G A T C G A G T C A T C G A T C G A T C G T A G C C A G T A T G C A T G C T A G C A C T G
p-value:1e-13
log p-value:-3.021e+01
Information Content per bp:1.755
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.14%
Number of Background Sequences with motif440.3
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets53.7 +/- 24.3bp
Average Position of motif in Background52.8 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CGGGAGCCCGCCT
----AGCGCGCC-
 T A G C A T C G A T C G T A C G G T C A A T C G A T G C A T G C A T G C A C T G A T G C T A G C G A C T
A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CGGGAGCCCGCCT------
----GCCCCGCCCCCTCCC
 T A G C A T C G A T C G T A C G G T C A A T C G A T G C A T G C A T G C A C T G A T G C T A G C G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0095.1_Zfp161_1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGGGAGCCCGCCT--
NCANGCGCGCGCGCCA
 A C G T T A G C A T C G A T C G T A C G G T C A A T C G A T G C A T G C A T G C A C T G A T G C T A G C G A C T A C G T A C G T
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CGGGAGCCCGCCT--
---TTTCCCGCCMAV
 T A G C A T C G A T C G T A C G G T C A A T C G A T G C A T G C A T G C A C T G A T G C T A G C G A C T A C G T A C G T
A C G T A C G T A C G T C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGGGAGCCCGCCT----
--NTCGCGCGCCTTNNN
 T A G C A T C G A T C G T A C G G T C A A T C G A T G C A T G C A T G C A C T G A T G C T A G C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGGGAGCCCGCCT
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T T A G C A T C G A T C G T A C G G T C A A T C G A T G C A T G C A T G C A C T G A T G C T A G C G A C T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGGGAGCCCGCCT-----
-TACGCCCCGCCACTCTG
 T A G C A T C G A T C G T A C G G T C A A T C G A T G C A T G C A T G C A C T G A T G C T A G C G A C T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0039.1_Klf7_1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGGGAGCCCGCCT----
-TCGACCCCGCCCCTAT
 T A G C A T C G A T C G T A C G G T C A A T C G A T G C A T G C A T G C A C T G A T G C T A G C G A C T A C G T A C G T A C G T A C G T
A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T

Sp1(Zf)/Promoter/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CGGGAGCCCGCCT--
---GGCCCCGCCCCC
 T A G C A T C G A T C G T A C G G T C A A T C G A T G C A T G C A T G C A C T G A T G C T A G C G A C T A C G T A C G T
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL011.1_XCPE1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGGGAGCCCGCCT
---GGTCCCGCCC
 T A G C A T C G A T C G T A C G G T C A A T C G A T G C A T G C A T G C A C T G A T G C T A G C G A C T
A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C