Information for 5-ATTGGCTGAC (Motif 4)

C G T A A G C T A C G T A C T G A T C G A G T C A G C T A C T G T C G A G T A C
Reverse Opposite:
C A T G A G C T T G A C C T G A A C T G A T G C A G T C G T C A C T G A C G A T
p-value:1e-15
log p-value:-3.489e+01
Information Content per bp:1.774
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.66%
Number of Background Sequences with motif139.5
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets61.4 +/- 21.9bp
Average Position of motif in Background47.5 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---ATTGGCTGAC
CCGATTGGCT---
 A C G T A C G T A C G T C G T A A G C T A C G T A C T G A T C G A G T C A G C T A C T G T C G A G T A C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--ATTGGCTGAC
TGATTGGCTANN
 A C G T A C G T C G T A A G C T A C G T A C T G A T C G A G T C A G C T A C T G T C G A G T A C
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:ATTGGCTGAC
-TTGGCA---
 C G T A A G C T A C G T A C T G A T C G A G T C A G C T A C T G T C G A G T A C
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---ATTGGCTGAC--
CTGATTGGTCNATTT
 A C G T A C G T A C G T C G T A A G C T A C G T A C T G A T C G A G T C A G C T A C T G T C G A G T A C A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATTGGCTGAC
NTTGGCANN-
 C G T A A G C T A C G T A C T G A T C G A G T C A G C T A C T G T C G A G T A C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ATTGGCTGAC
-TWGTCTGV-
 C G T A A G C T A C G T A C T G A T C G A G T C A G C T A C T G T C G A G T A C
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATTGGCTGAC-----
AAATTTGCTGACTTAGA
 A C G T A C G T C G T A A G C T A C G T A C T G A T C G A G T C A G C T A C T G T C G A G T A C A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATTGGCTGAC
AATTTGCTGAC
 A C G T C G T A A G C T A C G T A C T G A T C G A G T C A G C T A C T G T C G A G T A C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ATTGGCTGAC
---NGCTN--
 C G T A A G C T A C G T A C T G A T C G A G T C A G C T A C T G T C G A G T A C
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATTGGCTGAC-
AAAATGCTGACT
 A C G T C G T A A G C T A C G T A C T G A T C G A G T C A G C T A C T G T C G A G T A C A C G T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T