Information for 6-GAAGGAGCCACGTGAC (Motif 18)

A C T G C T G A C G T A A C T G A C T G C T G A A C T G A T G C T G A C C G T A A T G C A C T G G A C T A C T G C G T A A G T C
Reverse Opposite:
A C T G C G A T A G T C C G T A A G T C A T C G A C G T A C T G A T C G A G T C A G C T A G T C A G T C A C G T A G C T A G T C
p-value:1e-9
log p-value:-2.082e+01
Information Content per bp:1.908
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.6 +/- 20.4bp
Average Position of motif in Background58.9 +/- 16.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1/MA0093.2/Jaspar

Match Rank:1
Score:0.69
Offset:6
Orientation:forward strand
Alignment:GAAGGAGCCACGTGAC-
------GCCACGTGACC
 A C T G C T G A C G T A A C T G A C T G C T G A A C T G A T G C T G A C C G T A A T G C A C T G G A C T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.68
Offset:6
Orientation:forward strand
Alignment:GAAGGAGCCACGTGAC
------KCCACGTGAC
 A C T G C T G A C G T A A C T G A C T G C T G A A C T G A T G C T G A C C G T A A T G C A C T G G A C T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

USF2/MA0526.1/Jaspar

Match Rank:3
Score:0.66
Offset:6
Orientation:forward strand
Alignment:GAAGGAGCCACGTGAC-
------GTCATGTGACC
 A C T G C T G A C G T A A C T G A C T G C T G A A C T G A T G C T G A C C G T A A T G C A C T G G A C T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAAGGAGCCACGTGAC------
GGAAGAGTCACGTGACCAATAC
 A C T G C T G A C G T A A C T G A C T G C T G A A C T G A T G C T G A C C G T A A T G C A C T G G A C T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G G C T A C G T A A C T G C T G A C T A G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A A T G C A G T C G T C A T C G A G A C T C G T A G A T C

PB0147.1_Max_2/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GAAGGAGCCACGTGAC--
----GTGCCACGCGACTG
 A C T G C T G A C G T A A C T G A C T G C T G A A C T G A T G C T G A C C G T A A T G C A C T G G A C T A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

TFEB/MA0692.1/Jaspar

Match Rank:6
Score:0.65
Offset:6
Orientation:forward strand
Alignment:GAAGGAGCCACGTGAC
------ATCACGTGAC
 A C T G C T G A C G T A A C T G A C T G C T G A A C T G A T G C T G A C C G T A A T G C A C T G G A C T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C

BHLHE41/MA0636.1/Jaspar

Match Rank:7
Score:0.65
Offset:6
Orientation:forward strand
Alignment:GAAGGAGCCACGTGAC
------GTCACGTGAC
 A C T G C T G A C G T A A C T G A C T G C T G A A C T G A T G C T G A C C G T A A T G C A C T G G A C T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C

Arntl/MA0603.1/Jaspar

Match Rank:8
Score:0.65
Offset:7
Orientation:reverse strand
Alignment:GAAGGAGCCACGTGAC-
-------NCACGTGACN
 A C T G C T G A C G T A A C T G A C T G C T G A A C T G A T G C T G A C C G T A A T G C A C T G G A C T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:9
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GAAGGAGCCACGTGAC
----BRGTCACGTGAC
 A C T G C T G A C G T A A C T G A C T G C T G A A C T G A T G C T G A C C G T A A T G C A C T G G A C T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:10
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:GAAGGAGCCACGTGAC
------ACCACGTGAC
 A C T G C T G A C G T A A C T G A C T G C T G A A C T G A T G C T G A C C G T A A T G C A C T G G A C T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C