Information for 11-AGCGCGGATT (Motif 16)

T C G A T A C G G T A C A T C G T A G C A T C G A T C G G C T A C G A T C A G T
Reverse Opposite:
G T C A G C T A C G A T T A G C T A G C A T C G T A G C C A T G A T G C A G C T
p-value:1e-9
log p-value:-2.268e+01
Information Content per bp:1.652
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif226.1
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets51.6 +/- 27.4bp
Average Position of motif in Background51.4 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX1/MA0711.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AGCGCGGATT--
----CGGATTAN
 T C G A T A C G G T A C A T C G T A G C A T C G A T C G G C T A C G A T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

GSC2/MA0891.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AGCGCGGATT---
---GNGGATTAGN
 T C G A T A C G G T A C A T C G T A G C A T C G A T C G G C T A C G A T C A G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

PB0185.1_Tcf1_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCGCGGATT---
TTGCCCGGATTAGG
 A C G T T C G A T A C G G T A C A T C G T A G C A T C G A T C G G C T A C G A T C A G T A C G T A C G T A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

GSC/MA0648.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGCGCGGATT---
---NNGGATTAGN
 T C G A T A C G G T A C A T C G T A G C A T C G A T C G G C T A C G A T C A G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

OTX2/MA0712.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AGCGCGGATT--
----NGGATTAA
 T C G A T A C G G T A C A T C G T A G C A T C G A T C G G C T A C G A T C A G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

PH0129.1_Otx1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGCGCGGATT-------
AGAGGGGATTAATTTAT
 T C G A T A C G G T A C A T C G T A G C A T C G A T C G G C T A C G A T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0126.1_Obox6/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCGCGGATT----
AAAAACGGATTATTG
 A C G T T C G A T A C G G T A C A T C G T A G C A T C G A T C G G C T A C G A T C A G T A C G T A C G T A C G T A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

Dmbx1/MA0883.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCGCGGATT------
TGAACCGGATTAATGAA
 A C G T T C G A T A C G G T A C A T C G T A G C A T C G A T C G G C T A C G A T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCGCGGATT------
TGAACCGGATTAATGAA
 A C G T T C G A T A C G G T A C A T C G T A G C A T C G A T C G G C T A C G A T C A G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGCGCGGATT--
NNTGTGGATTSS
 T C G A T A C G G T A C A T C G T A G C A T C G A T C G G C T A C G A T C A G T A C G T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G