Information for 4-GGAAAACCCC (Motif 8)

A C T G A T C G G T C A C G T A T C G A C G T A A G T C T A G C G T A C G T A C
Reverse Opposite:
A C T G C A T G A T C G A C T G C G A T A C G T A C G T A C G T A T G C A G T C
p-value:1e-11
log p-value:-2.602e+01
Information Content per bp:1.852
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif96.2
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets53.6 +/- 24.9bp
Average Position of motif in Background57.9 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:GGAAAACCCC
GGAAATCCCC
 A C T G A T C G G T C A C G T A T C G A C G T A A G T C T A G C G T A C G T A C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:GGAAAACCCC
GGAAANCCCC
 A C T G A T C G G T C A C G T A T C G A C G T A A G T C T A G C G T A C G T A C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAACCCC-
GGGAAATCCCCN
 A C G T A C T G A T C G G T C A C G T A T C G A C G T A A G T C T A G C G T A C G T A C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GGAAAACCCC
GGAAATTCCC
 A C T G A T C G G T C A C G T A T C G A C G T A A G T C T A G C G T A C G T A C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GGAAAACCCC
GGAAATTCCC
 A C T G A T C G G T C A C G T A T C G A C G T A A G T C T A G C G T A C G T A C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAACCCC
TGGAAAA----
 A C G T A C T G A T C G G T C A C G T A T C G A C G T A A G T C T A G C G T A C G T A C
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:7
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GGAAAACCCC
GGGGGAATCCCC
 A C G T A C G T A C T G A T C G G T C A C G T A T C G A C G T A A G T C T A G C G T A C G T A C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB2/MA0778.1/Jaspar

Match Rank:8
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGAAAACCCC-
AGGGGATTCCCCT
 A C G T A C G T A C T G A T C G G T C A C G T A T C G A C G T A A G T C T A G C G T A C G T A C A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAACCCC
NNTGGAAANN---
 A C G T A C G T A C G T A C T G A T C G G T C A C G T A T C G A C G T A A G T C T A G C G T A C G T A C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAACCCC
AATGGAAAAT---
 A C G T A C G T A C G T A C T G A T C G G T C A C G T A T C G A C G T A A G T C T A G C G T A C G T A C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T