Information for 7-AGCAGCTAAAGCA (Motif 6)

C G T A A C T G G T A C C G T A C T A G A G T C C G A T C G T A C G T A C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G A G T C C G A T
p-value:1e-11
log p-value:-2.659e+01
Information Content per bp:1.922
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 23.2bp
Average Position of motif in Background41.5 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hmx1/MA0896.1/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGCAGCTAAAGCA-
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T C G T A A C T G G T A C C G T A C T A G A G T C C G A T C G T A C G T A C G T A A C T G A G T C C G T A A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGCAGCTAAAGCA-
ACAAGCAATTAATGAAT
 A C G T A C G T A C G T C G T A A C T G G T A C C G T A C T A G A G T C C G A T C G T A C G T A C G T A A C T G A G T C C G T A A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGCAGCTAAAGCA
AGAAACGAAAGT-
 C G T A A C T G G T A C C G T A C T A G A G T C C G A T C G T A C G T A C G T A A C T G A G T C C G T A
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGCAGCTAAAGCA-
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T C G T A A C T G G T A C C G T A C T A G A G T C C G A T C G T A C G T A C G T A A C T G A G T C C G T A A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGCAGCTAAAGCA-
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T C G T A A C T G G T A C C G T A C T A G A G T C C G A T C G T A C G T A C G T A A C T G A G T C C G T A A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

Hmx2/MA0897.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGCAGCTAAAGCA-
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T C G T A A C T G G T A C C G T A C T A G A G T C C G A T C G T A C G T A C G T A A C T G A G T C C G T A A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGCAGCTAAAGCA-
ACAAGCAATTAAAGAAT
 A C G T A C G T A C G T C G T A A C T G G T A C C G T A C T A G A G T C C G A T C G T A C G T A C G T A A C T G A G T C C G T A A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGCAGCTAAAGCA
-GRTGMTRGAGCC
 C G T A A C T G G T A C C G T A C T A G A G T C C G A T C G T A C G T A C G T A A C T G A G T C C G T A
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGCAGCTAAAGCA--
AAACAGACAAAGGAAT
 A C G T C G T A A C T G G T A C C G T A C T A G A G T C C G A T C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----AGCAGCTAAAGCA
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T C G T A A C T G G T A C C G T A C T A G A G T C C G A T C G T A C G T A C G T A A C T G A G T C C G T A
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G