Information for 17-CTAAATTTAGTTT (Motif 23)

A G T C A G C T C G T A G T C A G T C A A C G T A C G T A G C T C G T A A C T G G C A T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A G T C A C G T C T G A G T C A G T C A A C G T A C G T A C G T C T G A A C T G
p-value:1e-8
log p-value:-1.949e+01
Information Content per bp:1.773
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif28.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets35.1 +/- 13.5bp
Average Position of motif in Background44.7 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CTAAATTTAGTTT
GGACTGAATTCATGCC
 A C G T A C G T A C G T A G T C A G C T C G T A G T C A G T C A A C G T A C G T A G C T C G T A A C T G G C A T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PB0176.1_Sox5_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTAAATTTAGTTT
TATCATAATTAAGGA-
 A C G T A C G T A C G T A G T C A G C T C G T A G T C A G T C A A C G T A C G T A G C T C G T A A C T G G C A T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTAAATTTAGTTT
TCTATTTATAGN--
 A C G T A G T C A G C T C G T A G T C A G T C A A C G T A C G T A G C T C G T A A C T G G C A T A C G T A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTAAATTTAGTTT
GCTATTTATAGC--
 A C G T A G T C A G C T C G T A G T C A G T C A A C G T A C G T A G C T C G T A A C T G G C A T A C G T A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTAAATTTAGTTT
TCTATTTTTAGA--
 A C G T A G T C A G C T C G T A G T C A G T C A A C G T A C G T A G C T C G T A A C T G G C A T A C G T A C G T
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTAAATTTAGTTT---
-TNAGTTTCGATTTTN
 A G T C A G C T C G T A G T C A G T C A A C G T A C G T A G C T C G T A A C T G G C A T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

PROP1/MA0715.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTAAATTTAGTTT
--TAATTTAATTA
 A G T C A G C T C G T A G T C A G T C A A C G T A C G T A G C T C G T A A C T G G C A T A C G T A C G T
A C G T A C G T G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A

PH0087.1_Irx6/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTAAATTTAGTTT
ANTTNTACATGTANTTN
 A C G T A C G T A C G T A C G T A G T C A G C T C G T A G T C A G T C A A C G T A C G T A G C T C G T A A C T G G C A T A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTAAATTTAGTTT-
AATATACATGTAATATA
 A C G T A C G T A C G T A G T C A G C T C G T A G T C A G T C A A C G T A C G T A G C T C G T A A C T G G C A T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

MF0008.1_MADS_class/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTAAATTTAGTTT
CCATATATGG---
 A G T C A G C T C G T A G T C A G T C A A C G T A C G T A G C T C G T A A C T G G C A T A C G T A C G T
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T A C G T A C G T