Information for 7-SCMTCCRGGMCWCGGW (Motif 22)

A T G C A G T C G T A C A C G T A G T C A G T C C T G A A C T G A T C G G T A C A G T C C G A T A G T C A T C G A T C G C G A T
Reverse Opposite:
G C T A A T G C A T G C C T A G C G T A A C T G A C T G A T G C A G T C A G C T A C T G A C T G C G T A A C T G A C T G A T C G
p-value:1e-8
log p-value:-2.006e+01
Information Content per bp:1.839
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.4 +/- 21.0bp
Average Position of motif in Background49.8 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:SCMTCCRGGMCWCGGW---
-----CAGGCCNNGGCCNN
 A T G C A G T C G T A C A C G T A G T C A G T C C T G A A C T G A T C G G T A C A G T C C G A T A G T C A T C G A T C G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:SCMTCCRGGMCWCGGW
----CTAGGCCT----
 A T G C A G T C G T A C A C G T A G T C A G T C C T G A A C T G A T C G G T A C A G T C C G A T A G T C A T C G A T C G C G A T
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:SCMTCCRGGMCWCGGW
----CNAGGCCT----
 A T G C A G T C G T A C A C G T A G T C A G T C C T G A A C T G A T C G G T A C A G T C C G A T A G T C A T C G A T C G C G A T
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-SCMTCCRGGMCWCGGW
TACATCCGGGT------
 A C G T A T G C A G T C G T A C A C G T A G T C A G T C C T G A A C T G A T C G G T A C A G T C C G A T A G T C A T C G A T C G C G A T
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---SCMTCCRGGMCWCGGW
NTCCCCTCAGGGANT----
 A C G T A C G T A C G T A T G C A G T C G T A C A C G T A G T C A G T C C T G A A C T G A T C G G T A C A G T C C G A T A G T C A T C G A T C G C G A T
G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:SCMTCCRGGMCWCGGW
ACATCCTGNT------
 A T G C A G T C G T A C A C G T A G T C A G T C C T G A A C T G A T C G G T A C A G T C C G A T A G T C A T C G A T C G C G A T
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-SCMTCCRGGMCWCGGW
TGCCCCCGGGCA-----
 A C G T A T G C A G T C G T A C A C G T A G T C A G T C C T G A A C T G A T C G G T A C A G T C C G A T A G T C A T C G A T C G C G A T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:SCMTCCRGGMCWCGGW
--NTCAAGGTCA----
 A T G C A G T C G T A C A C G T A G T C A G T C C T G A A C T G A T C G G T A C A G T C C G A T A G T C A T C G A T C G C G A T
A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-SCMTCCRGGMCWCGGW
NACTTCCGGT-------
 A C G T A T G C A G T C G T A C A C G T A G T C A G T C C T G A A C T G A T C G G T A C A G T C C G A T A G T C A T C G A T C G C G A T
G A T C T C G A A G T C C G A T C G A T G T A C G T A C A C T G A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:SCMTCCRGGMCWCGGW
CGCGCCGGGTCACGTA
 A T G C A G T C G T A C A C G T A G T C A G T C C T G A A C T G A T C G G T A C A G T C C G A T A G T C A T C G A T C G C G A T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A